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News: EuroBioC2023 abstract submission is open!
presentation EuroBioC2023 Conference community Bioconductor
written 2.7 years ago by ▴ 100
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2
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518
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GBCC2025: New Scholarship Opportunities Available!
Community Conference GBCC2025 Bioconductor
updated 10 weeks ago by • 0 • written 5 months ago by ▴ 100
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News: EuroBioC2025: Abstract Submissions Open!
EuroBioC2025 Community Conference Bioconductor
8 months ago Maria Doyle ▴ 100
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421
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News: GBCC2025 Abstract Submissions & Registration Now Open!
Community Conference GBCC2025 Bioconductor
8 months ago Maria Doyle ▴ 100
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260
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News: Announcing the GBCC2025 Logo Design Winner!
Community Conference GBCC2025 Bioconductor
9 months ago Maria Doyle ▴ 100
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News: Bioconductor Course, Kenya 2025: Applications Open!
Events Community Training Africa Bioconductor
9 months ago Maria Doyle ▴ 100
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4
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2.2k
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News: EuroBioC2023 abstract submission closing soon!
presentation EuroBioc2023 Conference community Bioconductor
written 2.5 years ago by ▴ 100
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0
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539
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News: Announcing the GBCC2025 Logo Design Contest!
Conference Community Galaxy GBCC2025 Bioconductor
12 months ago Maria Doyle ▴ 100
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495
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News: Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries Community Teaching Bioconductor
13 months ago Maria Doyle ▴ 100
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1.0k
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News: Save the Date for EuroBioC2025 in Barcelona!
EuroBioC2025 Conference Bioconductor Community
14 months ago Maria Doyle ▴ 100
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4
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2.1k
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News: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and Galaxy!
Conference Bioconductor Community
updated 17 days ago by • 0 • written 14 months ago by ▴ 100
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739
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News: BioCAsia 2024 Registration Now Open!
BioCAsia2024 Conference Community Bioconductor
14 months ago Maria Doyle ▴ 100
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524
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BioCAsia 2024 Abstract Deadline - August 26th
BioCAsia2024 Community Conference Bioconductor
14 months ago Maria Doyle ▴ 100
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674
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News: EuroBioC Updates: Important Deadlines
Conference EuroBioC2024 Bioconductor Community EuroBioC
14 months ago Maria Doyle ▴ 100
0
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0
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533
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EuroBioC2024 Flashtalks & Birds-of-a-Feather Sessions - submissions open!
Community Conference Bioconductor EuroBioC2024
15 months ago Maria Doyle ▴ 100
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597
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News: EuroBioC2024 Carpentries workshops Sep 2-3
Community Workshop Bioconductor EuroBioC2024
16 months ago Maria Doyle ▴ 100
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587
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News: BioC2024 in-person registration closes soon (July 10)
BioC2024 Conference Bioconductor Community
16 months ago Maria Doyle ▴ 100
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488
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EuroBioC2024 Registration is Open!
Community Conference Bioconductor EuroBioC2024
17 months ago Maria Doyle ▴ 100
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635
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News: BioC2024 Bioconductor Carpentries RNA-Seq Workshop July 22-23
BioC2024 Conference Bioconductor Community
17 months ago Maria Doyle ▴ 100
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547
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News: BioC2024 deadlines approaching
BioC2024 Bioconductor Community
18 months ago Maria Doyle ▴ 100
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748
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News: BioC2024 registration is now open!
BioC2024 Conference Bioconductor Community
20 months ago Maria Doyle ▴ 100
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856
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News: Bioconductor.org website new design - We Need Your Input!
Bioconductor Community Website
2.3 years ago Maria Doyle ▴ 100
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837
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News: Reminder: BioC2023, Awards, TAB Deadline approaching - May 31st!
Bioconductor Community BioC2023
2.4 years ago Maria Doyle ▴ 100
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1.0k
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News: RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
Bioconductor Event Community Training
2.5 years ago Maria Doyle ▴ 100
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944
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News: Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
Training Bioconductor Event Community Tutorial
2.5 years ago Maria Doyle ▴ 100
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925
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News: Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
Training Bioconductor Event Community News
2.5 years ago Maria Doyle ▴ 100
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1.8k
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News: BioC2023 abstract submission is now open!
presentation BioC2023 Conference community Bioconductor
updated 14 months ago by • 0 • written 2.7 years ago by ▴ 100
0
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0
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815
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News: Bioconductor call for events!
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2.7 years ago Maria Doyle ▴ 100
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1.1k
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News: Join the Community Advisory Board -- upcoming elections -- deadline Today
Bioconductor CAB bioconductoroversight community
written 2.9 years ago by 4.2k
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News: Seeking members for BioC2023 organizing committee
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2.8 years ago Maria Doyle ▴ 100
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965
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News: Seeking Outreachy interns and project proposals
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2.8 years ago Maria Doyle ▴ 100
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1.0k
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News: Translation Hackathon (community event) announcement
event translation community
3.3 years ago kozo.nishida • 0
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1.3k
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Job: Bioconductor Community Manager
Community Teaching Bioconductor
3.4 years ago Matthew Ritchie ▴ 1000
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News: Join the Bioconductor Community Advisory Board -- Deadline this Friday February 25
bioconductoroversight community CAB
3.7 years ago shepherl 4.2k
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News: Join the Bioconductor Community Advisory Board
bioconductoroversight community CAB
3.8 years ago • updated 3.7 years ago shepherl 4.2k
3
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0
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984
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News: Call for Community Volunteered Package Reviewers
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4.3 years ago shepherl 4.2k
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0
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1.1k
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News: Nominations for Bioconductor Technical Advisory Board are open
community Bioconductor
4.5 years ago Charlotte Soneson ▴ 170
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1.2k
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News: Community engagement, outreach, and diversity award
awards bioc2021 recognition community Bioconductor
4.5 years ago shepherl 4.2k
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0
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1.3k
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News: New Bioconductor Community Advisory Board Members for 2021
bioconductoroversight news community BiocVersion
4.6 years ago Matthew Ritchie ▴ 1000
4
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2
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2.8k
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News: Join the Bioconductor Community Advisory Board
bioconductoroversight community BiocVersion news
written 4.8 years ago by ▴ 1000
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News: Community engagement and outreach award
bioconductor bioc2020 award community News
written 5.4 years ago by 4.2k
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News: Bioconductor Community Advisory Board Members
news bioconductor oversight community News
5.6 years ago Matthew Ritchie ▴ 1000
7
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News: Bioconductor Community Advisory Board Nominees
news community bioconductor oversight News
updated 5.7 years ago by 21k • written 5.7 years ago by ▴ 1000
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News: Results: Bioconductor Community Survey
community feedback News
5.8 years ago Matthew Ritchie ▴ 1000
3
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1.4k
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News: Bioconductor Community Survey
feedback community News
6.1 years ago Matthew Ritchie ▴ 1000
45 results • Page 1 of 1
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Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
we can investigate this issue. thank you for bringing it to our attention
Comment: deseq2 filter the low counts by Michael Love 43k
> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…
Comment: deseq2 filter the low counts by empty_mt • 0
Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …
Comment: deseq2 filter the low counts by Michael Love 43k
Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering
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Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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