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News:
Bioconductor Release 3.16 Schedule
Release
Devel
packages
release
devel
2.4 years ago
shepherl
4.1k
4
votes
2
replies
1.4k
views
GenomicRanges::union fails on R devel
devel
GenomicRanges
3.3 years ago
Guillaume Devailly
▴ 60
3
votes
6
replies
1.5k
views
News:
Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software
Bioconductor
Devel
devel
updated 22 months ago by
darrelvanhoy
• 0 • written 23 months ago by
shepherl
4.1k
3
votes
18
replies
3.9k
views
News:
List of Deprecated Packages for Bioc3.18
Deprecation
devel
Bioconductor
Devel
19 months ago • updated 9 months ago
shepherl
4.1k
3
votes
1
reply
1.4k
views
Reverse the effect of useDevel()
bioconductor
devel
developers
updated 9.6 years ago by
Martin Morgan
25k • written 9.6 years ago by
andrew.j.skelton73
▴ 370
2
votes
9
replies
2.0k
views
New annotation package - no response from packages@bioconductor.org
Devel
devel
updated 3.6 years ago by
kayla.interdonato
▴ 160 • written 3.7 years ago by
athief
▴ 20
1
vote
0
replies
1.1k
views
News:
Bioconductor Release 3.15 Schedule
Devel
release
packages
Release
devel
2.9 years ago
shepherl
4.1k
1
vote
0
replies
1.2k
views
News:
Deadline for devel branch 3.8 to pass R CMD build and R CMD check
deadline
release
devel
freeze
News
6.3 years ago
shepherl
4.1k
1
vote
2
replies
1.3k
views
GO.db for Bioconductor 3.17
GO.db
devel
23 months ago
Amanda D. Clark
• 0
1
vote
0
replies
1.1k
views
News:
Bioconductor Release 3.14 Schedule
devel
Devel
release
packages
Release
3.4 years ago
shepherl
4.1k
0
votes
2
replies
1.3k
views
News:
List of Deprecated Packages for Bioc3.17
Bioconductor
Deprecation
Devel
devel
21 months ago • updated 20 months ago
shepherl
4.1k
0
votes
0
replies
1.0k
views
News:
knitr ERROR on Biocondcutor builders
Devel
Bioconductor
Packages
BuildReport
devel
3.5 years ago
shepherl
4.1k
0
votes
0
replies
882
views
News:
Last day to make commit before the RELEASE_3_13
Release
Devel
devel
release
Bioc3.13
3.7 years ago
shepherl
4.1k
0
votes
0
replies
988
views
News:
Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!
Bioconductor
release
devel
deadline
3.8 years ago • updated 3.7 years ago
shepherl
4.1k
0
votes
2
replies
1.8k
views
unable to load shared object Rsamtools.dll':
Devel
updated 3.3 years ago by
Mike Smith
★ 6.6k • written 3.3 years ago by
Franck
• 0
0
votes
0
replies
825
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release
Software
Bioconductor
Devel
2.8 years ago
shepherl
4.1k
0
votes
0
replies
188
views
News:
List of Deprecated Packages for Bioc3.20
Devel
Bioconductor
Release
3 months ago
shepherl
4.1k
0
votes
11
replies
1.7k
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
11 months ago • updated 3 months ago
shepherl
4.1k
0
votes
4
replies
1.5k
views
News:
List of Deprecated Packages for Bioc3.15
Devel
Deprecation
Release
Bioconductor
2.8 years ago • updated 2.3 years ago
shepherl
4.1k
0
votes
0
replies
936
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release
Devel
Bioconductor
Software
2.3 years ago
shepherl
4.1k
0
votes
2
replies
746
views
No compilation on Windows y compilation on linux
Devel
PackageType
deve
20 months ago
Franck RICHARD
• 0
0
votes
1
reply
1.2k
views
Job:
Research software engineer at UPF Barcelona
JobPosting
Devel
GSVA
Software
written 2.2 years ago by
Robert Castelo
★ 3.4k
0
votes
0
replies
759
views
News:
Last day to make commits before Release 3.16
Release
Devel
Bioconductor
release
devel
2.2 years ago
shepherl
4.1k
0
votes
3
replies
1.1k
views
Package Review/Release Timeline
Devel
updated 2.6 years ago by
Gordon Smyth
52k • written 2.6 years ago by
Jonathan
• 0
0
votes
2
replies
1.0k
views
News:
List of Deprecated Packages for Bioc3.16
Release
Deprecation
Devel
Bioconductor
2.3 years ago • updated 2.2 years ago
shepherl
4.1k
0
votes
4
replies
1.5k
views
News:
Important Bioconductor Release 3.18 deadlines this week
Release
Devel
release
devel
updated 15 months ago by
Guido Hooiveld
★ 4.1k • written 15 months ago by
shepherl
4.1k
0
votes
3
replies
879
views
Suggested package missing from Development version of Bioconductor
Devel
updated 16 months ago by
shepherl
4.1k • written 16 months ago by
Richard
• 0
0
votes
1
reply
2.2k
views
Is there a way to change the name of R package that is already published on bioconductor?
r
developers
devel
updated 9.2 years ago by
Martin Morgan
25k • written 9.2 years ago by
MarcinKosiński
• 0
0
votes
0
replies
1.6k
views
News:
Dockers have been updated for Bioc3.6 and Bioc3.7
docker
bioconductor
release
devel
News
7.2 years ago
shepherl
4.1k
0
votes
1
reply
1.3k
views
News:
List of Deprecated Package Bioc 3.9
deprecate
release
software
devel
News
6.1 years ago
shepherl
4.1k
0
votes
1
reply
1.4k
views
News:
List of Deprecated Package Bioc 3.9
deprecate
release
devel
software
experimentdata
News
5.9 years ago
shepherl
4.1k
0
votes
1
reply
1.2k
views
News:
Deadline for devel branch 3.9 to pass R CMD build and R CMD check
release
devel
deadline
freeze
News
5.8 years ago
shepherl
4.1k
0
votes
0
replies
1.0k
views
News:
Deadline for commits to current Release 3.9 Branch and Devel 3.10
release
freeze
deadline
devel
News
5.3 years ago
shepherl
4.1k
0
votes
0
replies
1.1k
views
News:
Important Deadlines for RELEASE
release
devel
deadline
News
updated 5.3 years ago by
Martin Morgan
25k • written 5.3 years ago by
shepherl
4.1k
0
votes
0
replies
914
views
News:
Deadline for devel branch 3.11 to pass R CMD build and R CMD check
release
devel
bioconductor
News
4.8 years ago
shepherl
4.1k
0
votes
0
replies
1.1k
views
News:
Import Deadlines for RELEASE 3.11
release
devel
deadline
bioconductor
News
4.8 years ago
shepherl
4.1k
36 results • Page
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Answer: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
by
Robert Castelo
★ 3.4k
Following the discussion of this post, the package [gDNAx](https://bioconductor.org/packages/gDNAx) has been fixed in devel and release 1.4…
Answer: Selection of correct coefficients or contrasts in DESeq2
by
James W. MacDonald
67k
Using R's model formulation for three-way interactions is probably not the way to go here. Or at least I wouldn't do it that way. An easier…
Comment: How to generate circular cnetplot and color nodes and edges in the same plot ?
by
Blandine
• 0
Thank you so much ! It's working !
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
by
James W. MacDonald
67k
Yes. If you have the Illumina IDs, then all the annotation data that `cpg.annotate` uses will be based on hg19. It doesn't matter if TCGA l…
Comment: Recount3 data correspond to TCGA data
by
Leonardo Collado Torres
★ 1.1k
Thanks @fep29! ^^
Votes
A: DESeq2 interaction term
Comment: Recount3 data correspond to TCGA data
Answer: DESeq2- merging technical vs biological replicates
Answer: SingleCellExperiment convenience function for metadata+expression?
How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.
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