Bioconductor Ensembldb

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236

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ensembldb

updated 8 days ago by James W. MacDonald 65k • written 8 days ago by Fara • 0

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167

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ensembldb transcriptome genome coordinateconversion

updated 4 weeks ago by Michael Love 41k • written 4 weeks ago by saadmurtazakhan ▴ 10

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222

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TxDb.Mmusculus.UCSC.mm9.knownGene ensembldb GenomicFeatures Mus_musculus

updated 11 weeks ago by James W. MacDonald 65k • written 11 weeks ago by ramonmassoni ▴ 10

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308

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ensembldb genomei GenomeInfoDb

11 weeks ago Kai Hu ▴ 70

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225

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ensembldb biomaRt

updated 11 weeks ago by Robin • 0 • written 12 weeks ago by Pez ▴ 10

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496

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Rstudio cDNA ensembldb NCBI

5 months ago R_Page • 0

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786

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RStudio convert ensembldb NCBI

5 months ago j_denton • 0

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554

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GO ensembldb

6 months ago Rockbar • 0

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832

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AnnotationHubSoftware ensembldb

updated 7 months ago by James W. MacDonald 65k • written 7 months ago by cjag • 0

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1.3k

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ensembldb

updated 9 months ago by James W. MacDonald 65k • written 9 months ago by Max ▴ 10

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486

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Rsubread ensembldb

updated 9 months ago by James W. MacDonald 65k • written 9 months ago by Ya • 0

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1.5k

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ensembldb biomaRt

updated 9 months ago by Michael Love 41k • written 9 months ago by Benjamin ▴ 30

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4.1k

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biomaRt ensembldb UniProt.ws

updated 6 months ago by Marcel Ramos 690 • written 20 months ago by Recep ▴ 20

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2.6k

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ensembldb SNP SNPData genomes

written 2.2 years ago by Weiqiong • 0

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5.8k

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Ensembl Rstudio ensembldb AnnotationHub ensdb

updated 7 weeks ago by shepherl 3.8k • written 2.3 years ago by jon.klonowski ▴ 40

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960

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Annotation biomaRt ensembldb

written 2.5 years ago by Lillian • 0

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5.6k

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ensembl ensembldb plant arabidopsis thaliana annotationhub

updated 28 days ago by Shiva • 0 • written 5.4 years ago by Guido Hooiveld ★ 3.9k

17 results • Page 1 of 1

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Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by fatinataly • 0

I tried also with oligo does not work, any other suggestion?

Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70

Hello. Thanks for the reply. Sorry about this. My testing is telling me that 1 is the default (a gap), not -1 (1bp overlap). Negative …

Comment: Differences in differential analysis methods for RNA-Seq by ATpoint ★ 4.1k

> I am just re-processing due to being uncertain about how they used the edgeR analysis to reach gene level edgeR devs published something…

Comment: Differences in differential analysis methods for RNA-Seq by james.zhang20 • 0

Thanks for the explanations, it has helped clarify some things. Unfortunately, I am working from an early access public dataset (https://do…

Answer: Deseq2 and Normalization of RNA sequencing data by ATpoint ★ 4.1k

There is no expectation of normality that is realistic in terms of expression level. Levels are widely different between genes, and counts …

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A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

SPIA plotP giving error

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Popular Question to rohitsatyam102 ▴ 20