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exonmap
•
reset
2
votes
20
replies
5.3k
views
Important r packages not available for R version 3.1.1
exonmap
exon array analysis
bioconductor
9.2 years ago
svlachavas
▴ 830
0
votes
7
replies
1.8k
views
exonmap/xmapcore error
exonmap
exonmap
updated 13.8 years ago by
Crispin Miller
★ 1.1k • written 13.8 years ago by
anupam sinha
▴ 270
0
votes
10
replies
1.7k
views
exonmap RMA function
Microarray
Cancer
affyPLM
exonmap
Microarray
Cancer
affyPLM
exonmap
updated 16.3 years ago by
Yuan Jian
▴ 250 • written 16.3 years ago by
Martin Morgan
25k
0
votes
9
replies
1.6k
views
specifications for exonmap database config file?
GO
exonmap
GO
exonmap
updated 15.4 years ago by
Heidi Dvinge
★ 2.0k • written 15.4 years ago by
Joseph Fass
▴ 70
0
votes
6
replies
1.6k
views
Create affyBatch from mouse exon array data using ReadAffy or extractAffyBatch() from aroma.affymetrix
cdf
exonmap
xps
cdf
exonmap
xps
updated 15.8 years ago by
cstrato
★ 3.9k • written 15.8 years ago by
De Bondt, An-7114 [PRDBE]
▴ 190
0
votes
4
replies
1.4k
views
Problem with some exonmap X.to.Y functions
exonmap
exonmap
updated 16.7 years ago by
Crispin Miller
★ 1.1k • written 16.7 years ago by
Sophie Gallina
▴ 40
0
votes
4
replies
1.3k
views
problems rma() with mouse exon affy data in exonmap package
Survival
cdf
genefilter
affy
simpleaffy
plier
exonmap
Survival
cdf
genefilter
affy
updated 16.7 years ago by
James W. MacDonald
65k • written 16.7 years ago by
bruce
▴ 20
2
votes
1
reply
1.3k
views
Best way to do quality control and analysis on Exon arrays
Annotation
Cancer
affy
exonmap
Annotation
Cancer
affy
exonmap
updated 8.7 years ago by
nicholaserho
▴ 10 • written 14.9 years ago by
Daniel Brewer
★ 1.9k
0
votes
6
replies
1.3k
views
exonmap install
affy
exonmap
affy
exonmap
updated 17.1 years ago by
James W. MacDonald
65k • written 17.1 years ago by
Dick Beyer
★ 1.4k
0
votes
2
replies
1.1k
views
exon array annotation files
Annotation
Cancer
cdf
exonmap
Annotation
Cancer
cdf
exonmap
updated 14.6 years ago by
Michal Okoniewski
▴ 190 • written 14.6 years ago by
Paul Leo
▴ 970
0
votes
2
replies
1.1k
views
Affy Exon arrays
affy
exonmap
affy
exonmap
updated 14.9 years ago by
cstrato
★ 3.9k • written 14.9 years ago by
Tarca, Adi
▴ 570
0
votes
0
replies
1.1k
views
Affymetrix Array Rat Gene 1.0 ST - some annotation challenges
Annotation
Normalization
probe
affy
PROcess
oligo
exonmap
Annotation
Normalization
probe
15.4 years ago
Alexander C Cambon
▴ 30
0
votes
1
reply
1.1k
views
Exonmap mapping problems
Survival
genefilter
affy
plier
affyio
exonmap
Survival
genefilter
affy
plier
affyio
updated 16.7 years ago by
Michal Okoniewski
▴ 120 • written 16.7 years ago by
Tore Eriksson
▴ 10
0
votes
2
replies
1.1k
views
exonmap questions
affy
PROcess
exonmap
affy
PROcess
exonmap
updated 16.4 years ago by
James W. MacDonald
65k • written 16.4 years ago by
Jianping Jin
▴ 890
0
votes
1
reply
1.0k
views
exonmap/xmapcore and splicing.index
exonmap
xmapcore
exonmap
xmapcore
updated 13.6 years ago by
Michal Okoniewski
▴ 190 • written 13.6 years ago by
Peter Saffrey
▴ 70
0
votes
2
replies
1.0k
views
problems with Affymetrix probes id using exonmap and xmapcore
Annotation
cdf
exonmap
xmapcore
Annotation
cdf
exonmap
xmapcore
13.0 years ago
Tim Yates
▴ 250
0
votes
1
reply
963
views
Easy way to map Exon array probes to coordinates?
Cancer
exonmap
xps
Cancer
exonmap
xps
updated 12.6 years ago by
cstrato
★ 3.9k • written 12.6 years ago by
wrighth
▴ 260
0
votes
0
replies
944
views
problem with function to interrogate x:Map (exonmap)
Survival
genefilter
affy
plier
affyio
exonmap
Survival
genefilter
affy
plier
affyio
16.6 years ago
Wolfgang Raffelsberger
▴ 160
0
votes
0
replies
928
views
Bioconductor Digest, Vol 73, Issue 8
Microarray
Annotation
GO
hgu133plus2
probe
biomaRt
flowViz
exonmap
Microarray
Annotation
15.1 years ago
ramesh aathe
▴ 10
0
votes
1
reply
926
views
exonmap question: rma (& plier) crashes
exonmap
exonmap
updated 15.7 years ago by
Crispin Miller
★ 1.1k • written 15.7 years ago by
Tae-Hoon Chung
▴ 70
0
votes
0
replies
919
views
exonmap problems with rma normalization
Normalization
cdf
exonmap
Normalization
cdf
exonmap
13.0 years ago
Gomez Moruno, Antonio
▴ 30
0
votes
0
replies
916
views
exonmap error & questions (Affy mouse exon arrays)
exonmap
exonmap
15.8 years ago
Wolfgang Raffelsberger
▴ 160
0
votes
0
replies
899
views
Exonmap & xmapcore covdesc variable problem
affy
exonmap
xmapcore
affy
exonmap
xmapcore
11.8 years ago
Prime, John
▴ 10
0
votes
1
reply
892
views
exonMap problems
exonmap
exonmap
updated 14.0 years ago by
Tim Yates
▴ 250 • written 14.0 years ago by
Tobias Petri
▴ 40
0
votes
1
reply
883
views
ExonMap and xmap package question
probe
limma
convert
exonmap
probe
limma
convert
exonmap
13.4 years ago
Julie Zhu
★ 4.3k
0
votes
0
replies
882
views
R: Doubt about the use of xmapcore Vs exonmap
exonmap
xmapcore
exonmap
xmapcore
13.5 years ago
Manca Marco PATH
▴ 340
0
votes
1
reply
870
views
running exonmap package and chimp arrays
exonmap
exonmap
updated 15.1 years ago by
Michal Okoniewski
▴ 50 • written 15.1 years ago by
Pete Shepard
▴ 240
0
votes
0
replies
837
views
Human Affymetrix Exon microarrays
exonmap
exonmap
13.5 years ago
Ernest Turro
▴ 30
0
votes
0
replies
810
views
problems with Affymetrix probes id using exonmap and xmapcore
Annotation
cdf
exonmap
xmapcore
Annotation
cdf
exonmap
xmapcore
13.0 years ago
Gomez Moruno, Antonio
▴ 30
0
votes
0
replies
799
views
exonmap package - MySQL error
exonmap
exonmap
16.5 years ago
Dykema, Karl
▴ 90
0
votes
0
replies
752
views
exonmap install problem
Microarray
exonmap
Microarray
exonmap
16.7 years ago
Sophie Gallina
▴ 40
0
votes
0
replies
752
views
exonmap and splicing index
limma
exonmap
limma
exonmap
15.1 years ago
Mathieu Parent
▴ 30
0
votes
0
replies
747
views
Exonmap and Limma
limma
exonmap
limma
exonmap
15.1 years ago
Mathieu Parent
▴ 30
0
votes
0
replies
744
views
Exonmap to xmapcore
exonmap
xmapcore
exonmap
xmapcore
13.8 years ago
Fong Chun Chan
▴ 130
0
votes
1
reply
722
views
(no subject)
exonmap
xmapcore
exonmap
xmapcore
updated 13.5 years ago by
Marc Carlson
★ 7.2k • written 13.5 years ago by
Emma Lucas
▴ 10
0
votes
0
replies
707
views
Affy EXON Array: iterPLIER or RMA
affy
exonmap
affy
exonmap
16.0 years ago
juancui
▴ 10
0
votes
0
replies
676
views
bugs in exonmap?
exonmap
exonmap
16.0 years ago
Xin Zheng
▴ 30
0
votes
0
replies
673
views
[Fwd: Re: exonmap, xmap and xmapbridge]
exonmap
exonmap
16.2 years ago
Paul Hammer
▴ 220
0
votes
0
replies
640
views
Problem memory exonmap
exonmap
exonmap
15.1 years ago
Guido Leoni
▴ 200
0
votes
0
replies
636
views
[Fwd: exonmap install problem] Resolution note
exonmap
exonmap
16.7 years ago
Sophie Gallina
▴ 40
0
votes
0
replies
612
views
exonmap install problem
Cancer
exonmap
Cancer
exonmap
16.7 years ago
Seth Falcon
★ 7.4k
41 results • Page
1 of 1
Recent ...
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Comment: Math expression in shapeCustom legend in EnhancedVolcano
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pl23
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Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
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41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
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41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
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That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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