Showing : geoquery • reset
4
votes
8
replies
8.2k
views
getGEO - cannot Open URL issue
getGEO R GEOquery
9.9 years ago alptaciroglu ▴ 50
2
votes
4
replies
3.8k
views
getGEO function not identifying local file
geoquery getGEO
10.0 years ago Prasanth ▴ 20
1
vote
3
replies
3.7k
views
How to use expression set object to select genes using different gene selection methods
microarray biobase geoquery
updated 10.0 years ago by ▴ 840 • written 10.0 years ago by ▴ 10
0
votes
4
replies
4.0k
views
GEOquery: Error Message
geoquery error
updated 10.1 years ago by ▴ 10 • written 10.2 years ago by ▴ 130
8
votes
4
replies
6.1k
views
GEOquery: 0 features in the gset object
geoquery
updated 2.8 years ago by • 0 • written 10.1 years ago by ▴ 130
5
votes
14
replies
19k
views
How to load GEO series matrix file in R Bioconductor
geoquery
updated 10.2 years ago by 21k • written 10.2 years ago by ▴ 10
0
votes
3
replies
1.6k
views
namespace problem running GEOquery and justRMA in same session
affy geoquery
10.3 years ago Ty Thomson ▴ 100
2
votes
4
replies
1.9k
views
GEOquery: Missing featureNames after creating expression set from series matrix file
geoquery
updated 10.4 years ago by 68k • written 10.4 years ago by ▴ 10
1
vote
1
reply
2.0k
views
Error in Package GEOquery
geoquery error R microarray
updated 10.4 years ago by 68k • written 10.4 years ago by ▴ 20
2
votes
3
replies
3.2k
views
how to get all information of a platform for all samples using GEOquery
geoquery r
updated 10.5 years ago by 21k • written 10.5 years ago by ▴ 80
2
votes
13
replies
3.5k
views
SCAN.UPC: exception thrown when loading GEOQuery
scan.upc geoquery rcurl
10.7 years ago lep ▴ 90
0
votes
4
replies
1.9k
views
error reading GSE file
GEOquery GEOquery
updated 10.7 years ago by • 0 • written 14.2 years ago by ▴ 570
0
votes
2
replies
1.5k
views
GEOquery: How to use the tryCatch
r trycatch geoquery
updated 10.8 years ago by ★ 3.4k • written 10.8 years ago by • 0
1
vote
3
replies
6.4k
views
Geoquery: How to Continue Code Execution on Error
geoquery
updated 10.8 years ago by ★ 3.4k • written 10.8 years ago by • 0
0
votes
1
reply
1.3k
views
Incomplete dataset download from GEO
geoquery
updated 10.8 years ago by 21k • written 10.8 years ago by • 0
0
votes
1
reply
886
views
Determining and separating Affy Chips from GEOquery?
geoquery affy
updated 10.9 years ago by 68k • written 10.9 years ago by ▴ 20
3
votes
1
reply
2.8k
views
Processing RAW CEL files from GEO
CEL RAW geoquery readaffy
updated 10.9 years ago by 21k • written 10.9 years ago by ▴ 20
0
votes
7
replies
3.9k
views
Normalizing Expressionset Exprs without Raw CEL files
geoquery normalization
updated 10.9 years ago by ▴ 600 • written 10.9 years ago by ▴ 20
0
votes
1
reply
977
views
platform probes set ID microarray
microarray geoquery
updated 10.9 years ago by 25k • written 10.9 years ago by • 0
1
vote
1
reply
1.5k
views
Compare Row.names and ID from GSE datasets
geoquery GSE identical row.names
updated 10.9 years ago by 21k • written 10.9 years ago by ▴ 20
3
votes
3
replies
6.4k
views
Annotation from Submitter GPL in GSE dataset
annotation geoquery
updated 11.0 years ago by 68k • written 11.0 years ago by ▴ 20
0
votes
2
replies
4.8k
views
getting normalized expression values from GEO GSE files
PROcess GEOquery PROcess GEOquery
updated 11.1 years ago by ▴ 80 • written 11.1 years ago by ▴ 30
0
votes
6
replies
3.5k
views
processing Illumina HT12v4.0 expression data from GEO
Normalization affy PROcess GEOquery frma Normalization affy PROcess GEOquery frma
updated 11.2 years ago by 21k • written 11.2 years ago by ▴ 190
0
votes
2
replies
1.2k
views
GEOquery not parsing GSE expression sets
GEOquery GEOquery
updated 11.2 years ago by 21k • written 11.2 years ago by ▴ 10
0
votes
1
reply
1.8k
views
GEOquery error when retrieving raw files
GEOquery GEOquery
updated 11.6 years ago by 21k • written 11.6 years ago by ▴ 110
0
votes
3
replies
1.4k
views
Analysing Affy data with limma
limma GEOquery limma GEOquery
updated 11.8 years ago by 68k • written 11.8 years ago by ▴ 240
0
votes
1
reply
2.6k
views
Meta data for gene from GEO
Annotation gpls GEOquery GEOmetadb Annotation gpls GEOquery GEOmetadb
updated 11.8 years ago by 21k • written 11.8 years ago by ▴ 200
0
votes
0
replies
2.0k
views
Fw: Meta data for gene from GEO
Annotation gpls GEOquery GEOmetadb Annotation gpls GEOquery GEOmetadb
11.8 years ago rohan bareja ▴ 200
0
votes
4
replies
2.7k
views
Meta data for gene from GEO
GEOquery GEOmetadb GEOquery GEOmetadb
updated 11.8 years ago by 21k • written 11.8 years ago by ★ 13k
0
votes
4
replies
22k
views
Unable to find an inherited method for function ‘exprs’
Biobase GEOquery virtualArray Biobase GEOquery virtualArray
updated 12.1 years ago by ★ 13k • written 12.1 years ago by ▴ 210
0
votes
0
replies
902
views
GEOquery: incomplete feature data from GPL soft file
Annotation GEOquery Annotation GEOquery
12.2 years ago Sean Davis 21k
0
votes
0
replies
1.7k
views
GEOquery: incomplete feature data from GPL soft file
Annotation GEOquery Annotation GEOquery
12.3 years ago Renaud Gaujoux ▴ 170
0
votes
5
replies
1.8k
views
GEOquery and Sample Subsets
GEOquery GEOquery
updated 12.3 years ago by 21k • written 12.3 years ago by ▴ 750
0
votes
5
replies
2.4k
views
XML package - 500 internal server error
GEOquery ArrayExpress GEOquery ArrayExpress
updated 12.4 years ago by 21k • written 12.4 years ago by ▴ 740
0
votes
2
replies
2.2k
views
Error in getGEO command with GSEMatrix=TRUE
GEOquery GEOquery
updated 12.5 years ago by 21k • written 12.5 years ago by ▴ 40
0
votes
5
replies
1.9k
views
getGEO error
GEOquery GEOquery
updated 12.7 years ago by 21k • written 12.7 years ago by ▴ 440
0
votes
4
replies
2.3k
views
GEOquery getGEO error in read.table
Microarray GEOquery Microarray GEOquery
updated 12.7 years ago by ▴ 160 • written 12.7 years ago by ▴ 210
0
votes
0
replies
794
views
GEO newbie search question
limma GEOquery limma GEOquery
12.8 years ago Sean Davis 21k
0
votes
0
replies
948
views
Fw: download GSE data with GEOquery - Ignore this message
GEOquery GEOquery
12.8 years ago carol white ▴ 680
0
votes
0
replies
1.2k
views
download GSE data with GEOquery
GEOquery GEOquery
12.8 years ago carol white ▴ 680
0
votes
1
reply
2.1k
views
GEOquery, GSEMatrix parameter and lifecycle of GEO series data
GO Biobase PROcess GEOquery GO Biobase PROcess GEOquery
updated 13.2 years ago by 21k • written 13.2 years ago by ▴ 440
0
votes
3
replies
2.0k
views
GEOquery, GSEMatrix parameter and lifecycle of GEO series data
PROcess GEOquery PROcess GEOquery
13.2 years ago Gustavo Fernández Bayón ▴ 440
0
votes
1
reply
1.1k
views
GEOquery install problem with openSUSE 11.4 and R 2.15
GEOquery GEOquery
updated 13.3 years ago by 21k • written 13.3 years ago by ▴ 60
2
votes
15
replies
10k
views
GEOquery: getGEO() doesn\'t work (error \"invalid \'nlines\' argument\")
GEOquery GEOquery
updated 13.3 years ago by 68k • written 13.3 years ago by ★ 13k
0
votes
4
replies
3.3k
views
GEOquery loading error
hgu133plus2 GEOquery BiocInstaller hgu133plus2 GEOquery BiocInstaller
updated 13.3 years ago by ★ 8.2k • written 13.3 years ago by ★ 13k
0
votes
1
reply
3.1k
views
GEOquery package
GEOquery GEOquery
updated 13.4 years ago by ★ 8.2k • written 13.4 years ago by ▴ 30
0
votes
6
replies
1.6k
views
installation error of a bioconductor package in my workspace
GEOquery GEOquery
updated 13.4 years ago by ▴ 680 • written 13.4 years ago by ★ 8.2k
0
votes
5
replies
1.9k
views
installation error of a bioconductor package in my workspace
GEOquery GEOquery
13.4 years ago carol white ▴ 680
0
votes
1
reply
869
views
beadarray vignette has broken code in R2.14.1?
illuminaHumanv2 limma GEOquery beadarray illuminaHumanv2 limma GEOquery beadarray
updated 13.6 years ago by ▴ 20 • written 13.6 years ago by ★ 8.2k
0
votes
0
replies
795
views
beadarray vignette has broken code in R2.14.1?
illuminaHumanv2 limma GEOquery beadarray illuminaHumanv2 limma GEOquery beadarray
13.6 years ago Henriquez, Nick ▴ 20
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Comment: DiffBind - question on the use of filtered or unfiltered input data by deltaexecutor4 • 0
FFH4X is a [Free Fire mod][1] menu APK that offers cheats like auto headshot, aimbot, ESP, wallhack, and unlimited skins. Players use it to…
Comment: GO.db and others package Download failure by James W. MacDonald 68k
Also, you never need to use anything but `BiocManager::install` to install any package, which has the beneficial side effect of ensuring th…
Comment: GO.db and others package Download failure by James W. MacDonald 68k
Yes. Your packages have odd Y version numbers (where the version is X.Y.Z). That means they are devel packages (release versions have even …
Comment: GO.db and others package Download failure by Skyler • 0
Am I using Bioc-devel?
Comment: GO.db and others package Download failure by James W. MacDonald 68k
Is there a reason to use Bioc-devel? If not, you should be using the release version (which I am, and which installs `GO.db` without compla…
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Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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