Bioconductor Igraph

Showing : igraph • reset

votes

629

views

GRanges igraph

updated 15 months ago by Lluís Revilla Sancho ▴ 730 • written 15 months ago by Bogdan ▴ 670

votes

replies

529

views

WGCNA igraph

17 months ago María José • 0

votes

replies

1.1k

views

igraph networkanalysis Phylogenetics phyloseq

3.3 years ago Chantel • 0

votes

replies

2.9k

views

R 3.6.2 update problems with igraph and phangorn update Phyloseq igraph phangorn Tutorial

updated 4.4 years ago by Martin Morgan 25k • written 4.4 years ago by crgarcia • 0

votes

1.5k

views

igraph network gene corexpression rna-seq

updated 2.7 years ago by Gordon Smyth 50k • written 5.1 years ago by aiswaryabioinfo • 0

votes

replies

1.2k

views

STRINGdb igraph

5.1 years ago Samuel Lee • 0

votes

replies

1.4k

views

scater scran igraph scRNA-Seq rots

updated 5.2 years ago by Aaron Lun ★ 28k • written 5.2 years ago by hamza_karakurt ▴ 50

votes

909

views

igraph miR2Pathway Pathway page_rank

updated 6.1 years ago by Martin Morgan 25k • written 6.1 years ago by genomic8328 ▴ 10

votes

replies

995

views

graph pathways igraph

6.2 years ago genomic8328 ▴ 10

votes

replies

3.3k

views

igraph

6.6 years ago Andrew Box ▴ 10

vote

1.5k

views

QuACN igraph

6.8 years ago lljotall ▴ 10

votes

replies

2.0k

views

igraph spade

updated 6.9 years ago by johnheath346 • 0 • written 8.4 years ago by duncanjamesmurray01 • 0

votes

replies

1.6k

views

installation package installation topaseq igraph LD_LIBRARY_PATH

7.3 years ago jan.soderman • 0

votes

replies

970

views

ppi network analysis igraph

8.0 years ago Abhishek Pratap ▴ 190

votes

replies

1.2k

views

igraph software error adjacency matrix

updated 8.0 years ago by Paul Shannon ▴ 470 • written 8.0 years ago by Angel ▴ 40

votes

replies

1.2k

views

RamiGO R gene ontology igraph

8.3 years ago bkellman • 0

votes

replies

2.7k

views

igraph

updated 8.3 years ago by Hervé Pagès 16k • written 8.3 years ago by Angel ▴ 40

votes

1.9k

views

FEM igraph

updated 8.5 years ago by andrew • 0 • written 8.5 years ago by sirintra ▴ 10

votes

replies

2.0k

views

software error geNet igraph genetclassifier

updated 8.8 years ago by saibar ▴ 20 • written 8.8 years ago by alakatos ▴ 130

19 results • Page 1 of 1

Recent ...

Replies

Comment: Problem finding certain variables when importing a public database GSE73103 by Guido Hooiveld ★ 3.9k

FWIW: when I would like to make use of publicly available data, I always use the website to explore which metadata is submitted to GEO (and…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

This is `blockLength=200000`, and providing `seg=seg`? It's alright that it's not identical. In the bootstrapped data, you will now have l…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

Thank you, Michael. I used the script shared by you. The genomic distribution of the original and null loci looks like non-stationary. Plea…

Comment: ChAMP installation issue by shepherl 3.9k

Without showing the commands you tried and the full output including error it is impossible to help. Please provide additional information…

Answer: Gene set enrichment analysis by Guido Hooiveld ★ 3.9k

No, that is not possible. The idea of gene set enrichment analysis (GSEA) is that it checks which gene sets (pathways, GO categories) are e…

Votes

A: DEXSeq time course design

using variable in design formula

differential expression for Single-cell RNAseq data using edgeR

Why p value inconsistent when using different number of pathway score?

Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu

Awards • All