Bioconductor Import

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2.8k

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R GillespieColin ArrayExpress import TimeSeriesExperiment

updated 2.3 years ago by jacorvar ▴ 40 • written 3.2 years ago by eraldagjika ▴ 20

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1.2k

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.gpr raw Agilent MicroarrayData import

updated 4.2 years ago by Gordon Smyth 53k • written 4.2 years ago by irina.st.louis4 • 0

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2.0k

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import

4.5 years ago Ofelia • 0

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2.7k

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software error BigWig import windows

5.8 years ago lsilva.m • 0

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1.2k

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ddCt import analysis R qRTPCR

updated 6.4 years ago by Zhang, Jitao David ▴ 120 • written 6.4 years ago by mohammedtoufiq91 ▴ 10

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2.0k

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rtracklayer fasta import Biostrings

updated 7.0 years ago by Michael Lawrence ★ 11k • written 7.0 years ago by k.vitting.seerup ▴ 120

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4.3k

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bigwig rtracklayer import granges grangeslist

updated 8.4 years ago by Michael Lawrence ★ 11k • written 8.4 years ago by Assa Yeroslaviz ★ 1.5k

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1.7k

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rtracklayer gff gtf import import.gff3

updated 8.5 years ago by Martin Morgan 25k • written 8.5 years ago by Marlin ▴ 20

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1.6k

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rtracklayer bigwig import

updated 9.2 years ago by Michael Lawrence ★ 11k • written 9.2 years ago by zx8754 ▴ 10

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3.1k

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rtracklayer import bed files

9.8 years ago jmr • 0

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3.5k

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rtracklayer import bed

updated 9.8 years ago by Michael Lawrence ★ 11k • written 9.8 years ago by Peter Hickey ▴ 760

11 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by jwp48 • 0

Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!

Answer: Combining two proteomics datasets with limpa by Gordon Smyth 53k

Hi Andrew, We don't have that much experience combining different datasets with limpa yet, but my feeling is that the same DPC should be u…

Comment: Guitar R package requires update due to dependency GenomicFeatures by ferran.llobet.cabau ▴ 10

Thank you @seandavi for your feedback. I followed your recommendations and generated a [pull request][1] including the fix for this issue…

Comment: Ensembl plants at annotationHub? by Guido Hooiveld ★ 4.1k

Hope you don't mind I am not Johannes... ;-) Note that you nowadays can generate these yourselves using the `docker` image Johannes made av…

Comment: How does contrasts.fit do in limma to extract comparisons with a model having in by jtsy6383 • 0

Thanks for the reminder about DiffVar (for that project I ended up using GAMLSS in the end and haven't touched DiffVar since) and the alter…

Votes

Answer: Where do the filename come from in the LOLA datasets?

Bioconductor Maintainer Application

A: What is logFC and "B" in methylation analysis ??

limma moderated t-statistics and B-statistics

Comment: Guitar R package requires update due to dependency GenomicFeatures

Awards • All

Popular Question to Lluís Revilla Sancho ▴ 760