Bioconductor Indel

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1.7k

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PureCN indel somatic germline

updated 8.5 years ago by markus.riester ▴ 130 • written 8.5 years ago by pathkim • 0

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1.5k

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snv granges genomicranges variantannotation indel

updated 9.3 years ago by Michael Lawrence ★ 11k • written 9.3 years ago by addyS • 0

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1.2k

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pairwisealignment indel

updated 9.4 years ago by Hervé Pagès 16k • written 9.4 years ago by oliwindram ▴ 10

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2.4k

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indel customprodb fasta variantannotation

updated 10.4 years ago by xiaojing.wang ▴ 50 • written 10.4 years ago by kristenbeck527 • 0

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1.7k

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indel sequencing alignment

10.6 years ago Merienne Nicolas ▴ 120

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1.6k

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rnaseq subjunc indel

updated 11.0 years ago by Wei Shi ★ 3.6k • written 11.0 years ago by daniel.silvestre ▴ 100

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4.4k

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bam indel genomicalignments biostrings

updated 11.0 years ago by Nathaniel Hayden ▴ 180 • written 11.0 years ago by Stefanie Tauber ▴ 40

7 results • Page 1 of 1

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Comment: upstream git branches of bioc-release by TrentonCollier99 • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.

Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k

I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```

Votes

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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Scholar to Gordon Smyth 53k