Showing : infrastructure • reset
1
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4
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4.7k
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Affymetrix Human Gene 1.0 ST Array
Infrastructure cdf probe affy Infrastructure cdf probe affy
16.0 years ago Hans-Ulrich Klein ▴ 330
0
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5
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4.6k
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Finding mismatches between reads and reference sequence
Infrastructure Cancer BSgenome BSgenome Infrastructure Cancer BSgenome BSgenome
updated 11.1 years ago by ▴ 30 • written 11.1 years ago by 16k
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5
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3.4k
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Running the GSEA algorithm
Infrastructure PGSEA GSEABase SeqGSEA Infrastructure PGSEA GSEABase SeqGSEA
updated 10.1 years ago by ★ 1.3k • written 10.1 years ago by ▴ 660
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2
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2.6k
views
[R] Error in setMethod("combine"... was - Error when installing globaltest package
Infrastructure Cancer Biobase tkWidgets globaltest BiocInstaller BiocGenerics Cancer
updated 11.1 years ago by 25k • written 11.1 years ago by ▴ 40
1
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3
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2.6k
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deseq2 DESeqDataSet size when saved
deseq2 infrastructure deseqdataset importing
updated 5.6 years ago by 41k • written 5.6 years ago by • 0
4
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1
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2.6k
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News: Bioconductor git transition BETA phase starts now.
git svn infrastructure bioconductor News
6.8 years ago nitesh.turaga ▴ 140
0
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2
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2.5k
views
counting RNA-seq reads in R/BioC
GO Infrastructure Rsubread easyRNASeq GO Infrastructure Rsubread easyRNASeq
updated 11.6 years ago by ★ 6.8k • written 11.6 years ago by ▴ 880
0
votes
10
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2.4k
views
assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Microarray Annotation GO Network Regression Survival Infrastructure Escherichia coli ROC
11.1 years ago Julie Zhu ★ 4.3k
0
votes
7
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2.2k
views
Bioconductor 2.6 is released
Sequencing Microarray Visualization Infrastructure PROcess beadarray keggorthology eisa
updated 7.7 years ago by • 0 • written 14.0 years ago by ★ 1.6k
0
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0
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2.2k
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Prestigious Research Fellowship in Biostatistics/Bioinformatics
Microarray Survival Infrastructure Cancer Breast bridge Microarray Survival Infrastructure
19.9 years ago Wei, Wenbin ▴ 50
0
votes
8
replies
2.0k
views
good news and bad news
Infrastructure Cancer IRanges GenomicRanges Infrastructure Cancer IRanges GenomicRanges
updated 11.7 years ago by ★ 13k • written 11.7 years ago by 16k
0
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0
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1.9k
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job: head of core facility bioinformatics (Mainz/Germany)
Epigenetics Infrastructure Epigenetics Infrastructure
10.3 years ago Holger Klein ▴ 20
0
votes
4
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1.8k
views
DexSeq extracols option
RNASeq Microarray Genetics Annotation Normalization Infrastructure Cancer probe limma
updated 10.8 years ago by ★ 1.9k • written 10.8 years ago by ▴ 40
3
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0
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1.7k
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News: BioCAsia, 8 Sept 2015, Tokyo
sequencing transcription epigenomics visualization infrastructure News
8.9 years ago • updated 8.7 years ago Matthew Ritchie ▴ 1000
0
votes
5
replies
1.7k
views
extracting interactions between members of the KEGG pathways
Pathways Infrastructure Cancer graph Pathways Infrastructure Cancer graph
updated 18.1 years ago by ★ 5.5k • written 18.1 years ago by ▴ 90
0
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0
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1.6k
views
Bioinformatician Job at Pirbright Institute
Genetics Infrastructure Genetics Infrastructure
11.4 years ago Jan T Kim ▴ 50
0
votes
0
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1.6k
views
Bioconductor Digest, Vol 121, Issue 29
miRNA Annotation Normalization Visualization Clustering Infrastructure Cancer BSgenome vsn
11.1 years ago Matthew Thornton ▴ 350
0
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2
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1.6k
views
GSEABase error parsing msigdb_v3.1.xml
GO Infrastructure hgu95av2 Biobase annotate graph Category AnnotationDbi BiocGenerics GO
updated 11.3 years ago by 25k • written 11.3 years ago by ▴ 80
1
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0
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1.5k
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News: BioCAsia, 4th November 2016, Brisbane, Australia
conference transcription epigenomics visualization infrastructure News
7.8 years ago Matthew Ritchie ▴ 1000
0
votes
0
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1.5k
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Bioinformatics Academic Coordinator Job Posting
Proteomics Infrastructure Proteomics Infrastructure
11.8 years ago Guest User ★ 13k
0
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2
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1.5k
views
GGtools and GGBase installation problems
Infrastructure GUI Ruuid GGtools GGBase Infrastructure GUI Ruuid GGtools GGBase
updated 13.2 years ago by 6.7k • written 13.2 years ago by ▴ 460
0
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0
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1.4k
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illuminaHumanv4 mappings
Infrastructure Cancer Homo sapiens probe AnnotationDbi ASSIGN Infrastructure Cancer probe
12.6 years ago Mark Cowley ▴ 910
0
votes
0
replies
1.4k
views
Bioinformatics Facility Director Position at UC Riverside
Proteomics Infrastructure Proteomics Infrastructure
10.6 years ago Thomas Girke ★ 1.7k
0
votes
1
reply
1.4k
views
GSEABase error in parsing msigdb_v2.5.xml
GO Infrastructure hgu95av2 Biobase Ruuid AnnotationDbi GO Infrastructure hgu95av2 Biobase
updated 16.0 years ago by 25k • written 16.0 years ago by ▴ 130
0
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0
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1.3k
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[Job] Bioinformatician-NGS (Vienna, Austria)
Sequencing Infrastructure Sequencing Infrastructure
12.4 years ago Ido M. Tamir ▴ 150
0
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5
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1.3k
views
A code kata: evening-out *Ranges ends.
Infrastructure Cancer IRanges Infrastructure Cancer IRanges
13.7 years ago Steve Lianoglou ★ 13k
0
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0
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1.3k
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GSEA to discover co-regulated genes
Transcription Annotation Pathways Infrastructure probe convert GSEABase Transcription
15.3 years ago Paul Geeleher ★ 1.3k
0
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0
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1.3k
views
Open computational biologist position at Genentech
Infrastructure Infrastructure
11.3 years ago Michael Lawrence ★ 11k
0
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0
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1.3k
views
Job: Bioinformatician (postdoc, indefinite) Pirbright Institute
Infrastructure Infrastructure
11.1 years ago Jan T Kim ▴ 50
0
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0
replies
1.3k
views
BioC 1.9 is released!
BiocViews SNP Microarray Annotation Normalization Visualization Network Infrastructure SNP
17.6 years ago Seth Falcon ★ 7.4k
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1
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1.3k
views
BioC 2.2 now available
SNP Microarray Genetics Annotation Preprocessing Bayesian Clustering Infrastructure Cancer
updated 16.0 years ago by ★ 1.6k • written 16.0 years ago by 25k
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0
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1.2k
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S+ArrayAnalyzer and BioConductor Announcement
Microarray SAGE Annotation Infrastructure Microarray SAGE Annotation Infrastructure
19.9 years ago MOConnell@insightful.com ▴ 20
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0
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1.2k
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2 more Job Announcements
Genetics Infrastructure Genetics Infrastructure
12.1 years ago Jenny Drnevich ★ 2.0k
0
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0
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1.2k
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Bioinformatics Position Opening
Proteomics Infrastructure Proteomics Infrastructure
11.3 years ago Thomas Girke ★ 1.7k
0
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0
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1.2k
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biocep project - R for the Web and the Virtual R Workbench
Infrastructure PROcess Infrastructure PROcess
16.5 years ago kchine@ebi.ac.uk ▴ 10
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0
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1.2k
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Open Position - Academic Coordinator for Bioinformatics
Proteomics Infrastructure Proteomics Infrastructure
12.1 years ago Thomas Girke ★ 1.7k
0
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0
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1.2k
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Reopening of Computational Biologist position at Genentech
Infrastructure PROcess Infrastructure PROcess
10.7 years ago Michael Lawrence ★ 11k
0
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1
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1.1k
views
Newbie 'rflowcyt' question; problem loading facscan256.fcs
Survival Infrastructure Cancer hexbin prada rfcdmin rflowcyt Survival Infrastructure
updated 17.9 years ago by ★ 7.4k • written 17.9 years ago by ▴ 80
0
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5
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1.1k
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pooling for parallel hierarchical operations
Infrastructure Infrastructure
updated 11.5 years ago by 25k • written 11.5 years ago by ★ 11k
0
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0
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1.0k
views
2x2 factorial with dye effect, limma design
Microarray Infrastructure Microarray Infrastructure
17.3 years ago Gordon Smyth 50k
0
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2
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1.0k
views
*Ranges paper published
Infrastructure IRanges GenomicFeatures GenomicRanges Infrastructure IRanges GenomicFeatures
updated 10.7 years ago by ★ 4.2k • written 10.7 years ago by ★ 11k
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0
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975
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Research positions available in neuroproteomics
Proteomics Infrastructure Proteomics Infrastructure
15.2 years ago Abhilash Venu ▴ 340
0
votes
2
replies
974
views
"internal equal" overlap mode for GRangesList
Infrastructure Infrastructure
updated 12.5 years ago by ★ 1.6k • written 12.5 years ago by ★ 11k
0
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1
reply
970
views
convert IDs in a data frame?
GO Infrastructure Cancer GO Infrastructure Cancer
updated 10.8 years ago by ★ 7.2k • written 10.8 years ago by 16k
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0
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941
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2012 Bioconductor European Developers' Workshop - annoucement
Proteomics Infrastructure Proteomics Infrastructure
11.9 years ago Mark Robinson ▴ 880
0
votes
0
replies
931
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Job: Computational Biology Group at FHCRC is hiring
Infrastructure Cancer PROcess Infrastructure Cancer PROcess
18.8 years ago Seth Falcon ★ 7.4k
0
votes
0
replies
911
views
Staff Position at EBI: Computational Scientist / Bioconductor
Infrastructure Infrastructure
15.7 years ago Wolfgang Huber ★ 13k
0
votes
0
replies
878
views
[OT] Biostatistician position available
Microarray Infrastructure Microarray Infrastructure
18.6 years ago Diego Diez ▴ 760
0
votes
0
replies
869
views
Cel -> MAGE-ML
Infrastructure affy RMAGEML Infrastructure affy RMAGEML
18.5 years ago Steffen Durinck ▴ 420
0
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1
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854
views
Project Enquiry!
Infrastructure Infrastructure
15.7 years ago Kat ▴ 20
50 results • Page 1 of 1
Recent ...
Replies
Comment: Once again a "Model matrix not full rank" by James W. MacDonald 65k
You already ran a temporal assay. Now you can compare each time point to the baseline. The interaction term is only applicable if you have…
Comment: Timecourse RNASeq analysis by Aurora • 0
I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…
Comment: Once again a "Model matrix not full rank" by arfranco ▴ 130
But.. How to run a temporal assay?
Comment: Deseq2 and Normalization of RNA sequencing data by kcarey • 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP by Gordon Smyth 50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Votes
A: Print Differentially Expressed Exons From Dexseq Results
stuck on unimplemented type 'list' in 'EncodeElement'
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
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