Bioconductor Isoform

Showing : isoform • reset

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3.3k

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limma isoform edgeR salmon R

updated 10 months ago by ATpoint ★ 5.0k • written 11 months ago by mohammedtoufiq91 ▴ 10

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715

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Isoform IsoformSwitchAnalyzeR

2.5 years ago Craig • 0

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1.0k

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pacbio isoform

written 2.9 years ago by lhaiyan3 • 0

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3.3k

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RNASeqData isoform DESeq2

3.5 years ago • updated 3.4 years ago priyanka.m • 0

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1.9k

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isoform RNA-seq hisat2 stringtie ballgown

5.1 years ago ra711 • 0

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2.0k

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isoform deep sequencing voom

updated 5.2 years ago by Gordon Smyth 53k • written 5.2 years ago by Ina Hoeschele ▴ 620

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1.7k

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tximport isoform voom

updated 5.3 years ago by Gordon Smyth 53k • written 5.3 years ago by Ina Hoeschele ▴ 620

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1.9k

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cancer Isoform limma IsoformSwitchAnalyzeR

updated 6.0 years ago by k.vitting.seerup ▴ 120 • written 6.0 years ago by asmita • 0

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1.6k

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gene isoform quantification rna-seq

updated 6.2 years ago by swbarnes2 ★ 1.4k • written 6.2 years ago by angel.campos • 0

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1.8k

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isoformswitchanalyzer isoform differential isoform usage

written 6.9 years ago by A ▴ 60

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1.3k

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kallisto differential isoform usage isoform

8.0 years ago ilyco • 0

11 results • Page 1 of 1

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Comment: Issue with Soft-Thresholding in WGCNA by jun • 0

[Snow Rider 3D][1] offers a unique blend of excitement and strategy! Master your snowboarding techniques, explore breathtaking landscapes, …

Answer: Issue with Soft-Thresholding in WGCNA by misty.chickadee.vckc • 0

Hi Maria, your detailed explanation is super helpful! The NA power estimate in WGCNA can be tricky. I've sometimes seen that when the data …

Comment: Interpretation of output of AffyRNAdeg and hist commands by debasainalsa • 0

When working with AffyRNAdeg output it helps to think of the table like browsing a HEYTEA Menu each row shows a feature of your slides and …

Comment: DESeq2 for candidate gene analysis by piffelpaff ▴ 20

thank you so much for answering Dr. Love!

Answer: DESeq2 for candidate gene analysis by Michael Love 43k

Your plan 1 is reasonable. Run DESeq2 on the whole dataset to obtain size factors and moderated dispersion estimates and then extract the u…

Votes

A: Multi-level experiments in Limma

Answer: Should voomWithQualityWeights still be used when the sample-specific weights var

Answer: DESeq2 for candidate gene analysis

DESeq2 for candidate gene analysis

Answer: DESeq2 for candidate gene analysis

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