Bioconductor Isoform

Showing : isoform • reset

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475

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Isoform IsoformSwitchAnalyzeR

18 months ago Craig • 0

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776

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pacbio isoform

written 23 months ago by lhaiyan3 • 0

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2.6k

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RNASeqData isoform DESeq2

2.6 years ago • updated 2.4 years ago priyanka.m • 0

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1.5k

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isoform RNA-seq hisat2 stringtie ballgown

4.1 years ago ra711 • 0

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1.5k

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isoform deep sequencing voom

updated 4.2 years ago by Gordon Smyth 51k • written 4.2 years ago by Ina Hoeschele ▴ 620

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1.3k

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tximport isoform voom

updated 4.3 years ago by Gordon Smyth 51k • written 4.3 years ago by Ina Hoeschele ▴ 620

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1.5k

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cancer Isoform limma IsoformSwitchAnalyzeR

updated 5.1 years ago by k.vitting.seerup ▴ 120 • written 5.1 years ago by asmita • 0

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1.3k

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gene isoform quantification rna-seq

updated 5.2 years ago by swbarnes2 ★ 1.4k • written 5.2 years ago by angel.campos • 0

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1.4k

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isoformswitchanalyzer isoform differential isoform usage

written 5.9 years ago by A ▴ 40

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1.1k

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kallisto differential isoform usage isoform

7.0 years ago ilyco • 0

10 results • Page 1 of 1

Recent ...

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Comment: Question about using LRT test for time course experiments with DESeq2 by Denise • 0

Not really, we are testing some toxic compounds to identify genes that are activated in response to the toxic exposure. Genes that change o…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0

Hi again, Thank you for the response! Can you expound on why it is not a good idea? I realize that the expression levels/differential expr…

Answer: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k

No, that's not a good idea at all. You should be doing a meta-analysis with these data rather than trying to combine like that. `GeneMeta` …

Answer: GOstats kegg analysis in wheat - help - none of the objects in the first column by James W. MacDonald 67k

Check the help page for `KEGGFrame`. Your columns are out of order.

Comment: Question about using LRT test for time course experiments with DESeq2 by James W. MacDonald 67k

You are testing the interaction, so you are asking for those genes that change at any time *differently, depending on the treatment*. If co…

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Answer: DecideTest vs topTAGs in edgeR

Comment: DESeq Input from Salmon + tximport/tximeta

Answer: DESeq Input from Salmon + tximport/tximeta

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Popular Question to Assa Yeroslaviz ★ 1.5k