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1.8k

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R quantile list

2.6 years ago sat • 0

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list save dataframe

updated 3.3 years ago by shepherl 4.2k • written 3.3 years ago by orticello.1160797 ▴ 10

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TCGA tcgabiolinks list reformat

7.8 years ago Guido Hooiveld ★ 4.1k

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dnastringset list stringset

updated 8.3 years ago by Martin Morgan 25k • written 8.3 years ago by vinod.acear ▴ 50

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r iranges findoverlaps IntegerList List

9.2 years ago • updated 8.9 years ago jian_liangli • 0

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coercion data manipulation s4vectors List

9.3 years ago Jurat Shahidin ▴ 80

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deseq2 heatmap clustering file list

updated 10.1 years ago by Michael Love 43k • written 10.1 years ago by chariko • 0

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org.mm.eg.db select list

updated 10.1 years ago by James W. MacDonald 68k • written 10.1 years ago by Assa Yeroslaviz ★ 1.5k

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mirror preferred list

updated 10.4 years ago by Dan Tenenbaum ★ 8.2k • written 10.4 years ago by lejeczek ▴ 10

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Piano List

updated 10.5 years ago by Leif Väremo ▴ 70 • written 10.5 years ago by nonCodingGene ▴ 10

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rle list irange grangeslist

updated 10.6 years ago by Chris Seidel ▴ 80 • written 10.6 years ago by gen ▴ 30

11 results • Page 1 of 1

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Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G by dzv20413 • 0

Wow, GBCC 2025 sounds amazing, can not wait to see the logo contest results! Also, I just played [Level Devil][1] and it is super addictive…

Comment: Memory error while running alignments by Erik Wright ▴ 150

How much memory is available on the computer? A distance matrix of 50k sequences requires at least 50k*50k/2 * 8 bytes = 10GB, assuming the…

Comment: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by Gabriel • 0

Thank you very much for the reply. However, none of these three options seems to fit: 1) The genes for which NA appears do not have all 0 …

Comment: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames by ubjw24 • 0

Thank you for your replies. I got the problem solved by installing mutSignature with this line: ``` devtools::install_github("dami82/mutS…

Comment: DESeq2 design for haplotype MPRA by Rita • 0

Thank you very much, I appreciate it!

Votes

Comment: Check removeBatchEffect effectiveness

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?

Answer: DESeq2 design for haplotype MPRA

A: Different logFC (log2foldchange) values for genes from limma-voom and other too

Comment: Check removeBatchEffect effectiveness

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