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R quantile list

22 months ago sat • 0

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list save dataframe

updated 2.6 years ago by shepherl 4.1k • written 2.6 years ago by orticello.1160797 ▴ 10

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1.8k

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TCGA tcgabiolinks list reformat

7.0 years ago Guido Hooiveld ★ 4.1k

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4.1k

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dnastringset list stringset

updated 7.6 years ago by Martin Morgan 25k • written 7.6 years ago by vinod.acear ▴ 50

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r iranges findoverlaps IntegerList List

8.4 years ago • updated 8.2 years ago jian_liangli • 0

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2.0k

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coercion data manipulation s4vectors List

8.5 years ago Jurat Shahidin ▴ 80

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4.6k

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deseq2 heatmap clustering file list

updated 9.3 years ago by Michael Love 43k • written 9.3 years ago by chariko • 0

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3.9k

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org.mm.eg.db select list

updated 9.3 years ago by James W. MacDonald 67k • written 9.3 years ago by Assa Yeroslaviz ★ 1.5k

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1.2k

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mirror preferred list

updated 9.7 years ago by Dan Tenenbaum ★ 8.2k • written 9.7 years ago by lejeczek ▴ 10

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Piano List

updated 9.7 years ago by Leif Väremo ▴ 70 • written 9.7 years ago by nonCodingGene ▴ 10

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2.2k

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rle list irange grangeslist

updated 9.8 years ago by Chris Seidel ▴ 80 • written 9.8 years ago by gen ▴ 30

11 results • Page 1 of 1

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Answer: promoters_txdb <- promoters(txdb, upstream = 2000) is not 2000 by James W. MacDonald 67k

If you use `promoters` and do not provide an argument for something that has a default, you will get the default argument. Your last call t…

Comment: org.Hs.eg.db issue by k.panov • 0

installed R on another PC, works perfectly. ergo, problem outside of R probably..... :-(

Comment: MBDseq analysis using qsea package by Lukas ▴ 20

Hi, I checked in with Matthias and here is his response: You need to indicate "samples": "The indices of the samples for which individu…

Comment: DESeq2 analysis with transcript counts by sindhuri • 0

Thank you for the response. Currently I am using the R studio for analysis and Im running DESeq2 for analysis of the **transcript counts.ts…

Comment: iam not able to do retrive data using GEOquery R package by James W. MacDonald 67k

Another alternative is to use the `GEOmetadb` package ([vignette here)][1], which will allow you to make queries to identify GEO datasets t…

Votes

Answer: Issue carrying out DiffBind Analysis at a predefined peak set

Answer: Differential variability modelling with vst() expression

Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu

Answer: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu

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