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2.0k

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R quantile list

2.9 years ago sat • 0

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list save dataframe

updated 3.6 years ago by shepherl 4.3k • written 3.6 years ago by orticello.1160797 ▴ 10

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TCGA tcgabiolinks list reformat

8.0 years ago Guido Hooiveld ★ 4.1k

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dnastringset list stringset

updated 8.6 years ago by Martin Morgan 25k • written 8.6 years ago by vinod.acear ▴ 50

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r iranges findoverlaps IntegerList List

9.4 years ago • updated 9.2 years ago jian_liangli • 0

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coercion data manipulation s4vectors List

9.5 years ago Jurat Shahidin ▴ 80

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deseq2 heatmap clustering file list

updated 10.3 years ago by Michael Love 43k • written 10.3 years ago by chariko • 0

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org.mm.eg.db select list

updated 10.3 years ago by James W. MacDonald 68k • written 10.3 years ago by Assa Yeroslaviz ★ 1.5k

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mirror preferred list

updated 10.7 years ago by Dan Tenenbaum ★ 8.2k • written 10.7 years ago by lejeczek ▴ 10

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Piano List

updated 10.7 years ago by Leif Väremo ▴ 70 • written 10.7 years ago by nonCodingGene ▴ 10

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rle list irange grangeslist

updated 10.8 years ago by Chris Seidel ▴ 80 • written 10.8 years ago by gen ▴ 30

11 results • Page 1 of 1

Recent ...

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Comment: Clarification on counting in Rsubread (featureCounts) by Gordon Smyth 53k

Have you told featureCounts to do strand-specific counting? As pointed out by Frances Turner, you can lose reads if they overlap the gene …

Answer: Clarification on counting in Rsubread (featureCounts) by Frances Turner ▴ 10

You should look at the summary files produced by feature counts. This gives a breakdown of what happened to reads that were not assigned. Y…

Comment: Incosistencies in buildSNNGraph() function by ATpoint ★ 5.0k

Just played with this a bit and I think it comes down to not having a fixed seed before running the leiden thingy. Same goes for PCA and UM…

Answer: Incosistencies in buildSNNGraph() function by Aaron Lun ★ 29k

The most obvious thing that comes to mind is the RNG seed. `cluster_leiden()` does some random number generation, somewhere deep in the **i…

Comment: Opportunity to host EuroBioC2026 Preconference workshops! by TikTsokaas33ocissalpc • 0

Thank you for sharing the EuroBioC2026 workshop opportunity. I m interested in hosting a hands on session teaching reproducible data analys…

Votes

C: ControlGenes/ housekeeping genes Deseq2

Answer: Clarification on counting in Rsubread (featureCounts)

C: RNA-Seq analysis with Limma/edgeR, time course experiment, aberrant results

A: Conversion from counts to FPKM

Awards • All

Great Question to fl ▴ 20

Popular Question to Lluís Revilla Sancho ▴ 760