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0
votes
4
replies
855
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how to extract list in quantile in R
R
quantile
list
13 months ago
sat
• 0
0
votes
0
replies
1.7k
views
stuck on unimplemented type 'list' in 'EncodeElement'
list
save
dataframe
updated 22 months ago by
shepherl
3.8k • written 22 months ago by
orticello.1160797
• 0
0
votes
4
replies
1.5k
views
how to reformat complex list object (derived with TCGAbiolinks)?
TCGA
tcgabiolinks
list
reformat
6.3 years ago
Guido Hooiveld
★ 3.9k
3
votes
4
replies
3.7k
views
How to convert a DnaStringSet object to list of seq?
dnastringset
list
stringset
updated 6.8 years ago by
Martin Morgan
25k • written 6.8 years ago by
vinod.acear
▴ 50
1
vote
12
replies
2.1k
views
How can I integrate set of compressedList in multiple list into one without duplication?
r
iranges
findoverlaps
IntegerList
List
7.7 years ago • updated 7.5 years ago
jian_liangli
• 0
3
votes
5
replies
1.7k
views
How can I coerce "list" to S4 "List" (reproducible example is available)?
coercion
data manipulation
s4vectors
List
7.8 years ago
Jurat Shahidin
▴ 80
2
votes
3
replies
4.3k
views
Deseq2. Cluster of an specific list
deseq2
heatmap
clustering
file
list
updated 8.6 years ago by
Michael Love
41k • written 8.6 years ago by
chariko
• 0
4
votes
2
replies
3.4k
views
select keys from org.Mm.eg.db
org.mm.eg.db
select
list
updated 8.6 years ago by
James W. MacDonald
65k • written 8.6 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
972
views
preferred mirrors list - permanently
mirror
preferred
list
updated 8.9 years ago by
Dan Tenenbaum
★ 8.2k • written 8.9 years ago by
lejeczek
▴ 10
0
votes
1
reply
1.1k
views
Mixing list from Piano package output
Piano
List
updated 9.0 years ago by
Leif Väremo
▴ 70 • written 9.0 years ago by
nonCodingGene
▴ 10
2
votes
4
replies
1.8k
views
summing integer RLE
rle
list
irange
grangeslist
updated 9.1 years ago by
Chris Seidel
▴ 80 • written 9.1 years ago by
gen
▴ 30
11 results • Page
1 of 1
Recent ...
Replies
Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
camp
▴ 10
Yes, @atpoint is correct. decontX decontaminated counts are not integers due to the way the variation inference algorithm works, but you ca…
Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
ATpoint
★ 4.0k
I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123
by
Gordon Smyth
50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Votes
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
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