Showing : methyAnalysis • reset
1
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13
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2.2k
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MethylAid package visualize function not opening a web browser
illimina 450k methylation methyanalysis methylaid
8.6 years ago jdangelo • 0
4
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10
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4.5k
views
Illumina MethylationEPIC vs. 450K
methylumi minfi illuminahumanmethylation450k.db 450k methyanalysis
updated 8.2 years ago by ▴ 740 • written 8.2 years ago by ▴ 50
1
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9
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3.6k
views
strange results from differential methylation analysis using limma
limma methylation methyanalysis IMA
updated 2.0 years ago by 21k • written 7.2 years ago by • 0
0
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8
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2.3k
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methyAnalysis for DMR identification
convert methyAnalysis convert methyAnalysis
updated 10.2 years ago by ▴ 160 • written 10.2 years ago by ★ 13k
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6
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3.0k
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DMR identification: minfi speed, memory problems
Annotation convert minfi methyAnalysis bumphunter Annotation convert minfi methyAnalysis
updated 10.2 years ago by 66k • written 10.2 years ago by ★ 13k
1
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5
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1.3k
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Understanding methyAnalysis Results
methyAnalysis methyanalysis methylation illuminahumanmethylation450k.db
updated 9.2 years ago by ▴ 80 • written 9.2 years ago by ▴ 370
2
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4
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2.7k
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Problem in installing Bioconductor packages due to "IRanges"
lumi methylumi methyAnalysis
6.4 years ago topijush ▴ 10
0
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2
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1.3k
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genoset:::initGenoSet
methyAnalysis methyAnalysis
updated 11.3 years ago by ▴ 440 • written 11.3 years ago by ▴ 20
0
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2
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1.7k
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Loading Data into MethyAnalysis
Microarray methyAnalysis Microarray methyAnalysis
updated 11.3 years ago by ▴ 440 • written 11.3 years ago by ★ 13k
1
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2
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1.4k
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Methylation data visualization using methyAnalysis with minfi
methylation microarray illumina minfi methyanalysis
updated 5.4 years ago by ★ 1.3k • written 5.4 years ago by • 0
0
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1
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4.2k
views
methyAnalysis M values and Beta Values
methyAnalysis methyanalysis 450k
updated 9.2 years ago by ▴ 80 • written 9.2 years ago by ▴ 370
0
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1
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1.1k
views
methyAnalysis methyGenoSet function
methyAnalysis methyAnalysis
updated 11.4 years ago by 21k • written 11.4 years ago by ▴ 10
0
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1
reply
937
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problem with identifySigDMR command
methyAnalysis
7.8 years ago yuping.zhang • 0
0
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0
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626
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Diffrential Gene expression in a group of specific methylated prometor patience
GeneExpression methyAnalysis MethylationArray
3.5 years ago coobzie • 0
0
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0
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1.0k
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methyAnalysis: heatmapByChromosome not works
methyAnalysis
7.6 years ago Shicheng Guo • 0
0
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0
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1.7k
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Conversion of minfi format MethylSet to methyAnalysis format MethyGenoSet
Cancer charm minfi methyAnalysis Cancer charm minfi methyAnalysis
11.2 years ago Ed Schwalbe ▴ 20
0
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0
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818
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Recurring error in smoothMethygenoset step for MethyAnalysis
methyanalysis
6.5 years ago charleneee95 • 0
0
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0
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1.2k
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importing data problem with methyAnalysis package
Biophysics Annotation Preprocessing annotate lumi methyAnalysis Biophysics Annotation lumi
11.4 years ago Pan Du ▴ 440
0
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0
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734
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methyAnalysis - library(methyAnalysis) hangs when talking to Internet
methyanalysis
6.3 years ago mcahn • 0
0
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0
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1.7k
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methyAnalysis error with example data
methyanalysis
8.0 years ago Tom ▴ 10
0
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0
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1.7k
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DMR identification: minfi speed, memory problems
Annotation convert minfi methyAnalysis bumphunter Annotation convert minfi methyAnalysis
10.2 years ago Allegra Petti ▴ 120
21 results • Page 1 of 1
Recent ...
Replies
Answer: Errors in chromosome annotation-biomaRt by James W. MacDonald 66k
If you are just using HGNC symbols for the lookup, and you are trying to get NCBI IDs, then I wouldn't use `biomaRt` because it's based on …
Comment: Help with ENmix readidat by James W. MacDonald 66k
Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …
Comment: LRT, more than two conditions and pairwise comparisons by James W. MacDonald 66k
In that case, probably easiest to subset to the groups being compared.
Comment: Help with ENmix readidat by minardsmitha ▴ 10
Did you figure this out? I have the same issue.
Comment: LRT, more than two conditions and pairwise comparisons by boczniak767 ▴ 720
Thank you for response, apparently I still don't know much about statistics. In fact I want to campare time-profiles [and the LRT has been …
Votes
Answer: Control group between 2 batches have different expression in RNAseq data
Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?
Comment: DESeq2- Mysterious interaction suppresses DEGs
Answer: DESeq2- Mysterious interaction suppresses DEGs
Answer: Subsetting RNAseq data | voomaByGroup()
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