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methyAnalysis
•
reset
0
votes
0
replies
665
views
Diffrential Gene expression in a group of specific methylated prometor patience
GeneExpression
methyAnalysis
MethylationArray
3.7 years ago
coobzie
• 0
1
vote
2
replies
1.5k
views
Methylation data visualization using methyAnalysis with minfi
methylation
microarray
illumina
minfi
methyanalysis
updated 5.6 years ago by
Ou, Jianhong
★ 1.3k • written 5.6 years ago by
Adam_M
• 0
0
votes
0
replies
770
views
methyAnalysis - library(methyAnalysis) hangs when talking to Internet
methyanalysis
6.5 years ago
mcahn
• 0
2
votes
4
replies
2.8k
views
Problem in installing Bioconductor packages due to "IRanges"
lumi
methylumi
methyAnalysis
6.6 years ago
topijush
▴ 10
0
votes
0
replies
856
views
Recurring error in smoothMethygenoset step for MethyAnalysis
methyanalysis
6.7 years ago
charleneee95
• 0
1
vote
9
replies
3.8k
views
strange results from differential methylation analysis using limma
limma
methylation
methyanalysis
IMA
updated 2.2 years ago by
Sean Davis
21k • written 7.4 years ago by
RC
• 0
0
votes
0
replies
1.1k
views
methyAnalysis: heatmapByChromosome not works
methyAnalysis
7.8 years ago
Shicheng Guo
• 0
0
votes
1
reply
977
views
problem with identifySigDMR command
methyAnalysis
8.0 years ago
yuping.zhang
• 0
0
votes
0
replies
1.7k
views
methyAnalysis error with example data
methyanalysis
8.2 years ago
Tom
▴ 10
4
votes
10
replies
4.6k
views
Illumina MethylationEPIC vs. 450K
methylumi
minfi
illuminahumanmethylation450k.db
450k
methyanalysis
updated 8.4 years ago by
Peter Hickey
▴ 740 • written 8.4 years ago by
Ahdee
▴ 50
1
vote
13
replies
2.3k
views
MethylAid package visualize function not opening a web browser
illimina 450k methylation
methyanalysis
methylaid
8.8 years ago
jdangelo
• 0
0
votes
1
reply
4.3k
views
methyAnalysis M values and Beta Values
methyAnalysis
methyanalysis
450k
updated 9.4 years ago by
Pan Du
▴ 80 • written 9.4 years ago by
andrew.j.skelton73
▴ 370
1
vote
5
replies
1.4k
views
Understanding methyAnalysis Results
methyAnalysis
methyanalysis
methylation
illuminahumanmethylation450k.db
updated 9.4 years ago by
Pan Du
▴ 80 • written 9.4 years ago by
andrew.j.skelton73
▴ 370
0
votes
0
replies
1.7k
views
DMR identification: minfi speed, memory problems
Annotation
convert
minfi
methyAnalysis
bumphunter
Annotation
convert
minfi
methyAnalysis
10.4 years ago
Allegra Petti
▴ 120
0
votes
8
replies
2.4k
views
methyAnalysis for DMR identification
convert
methyAnalysis
convert
methyAnalysis
updated 10.4 years ago by
Giovanni Calice
▴ 160 • written 10.4 years ago by
Guest User
★ 13k
0
votes
6
replies
3.1k
views
DMR identification: minfi speed, memory problems
Annotation
convert
minfi
methyAnalysis
bumphunter
Annotation
convert
minfi
methyAnalysis
updated 10.4 years ago by
James W. MacDonald
66k • written 10.4 years ago by
Guest User
★ 13k
0
votes
0
replies
1.7k
views
Conversion of minfi format MethylSet to methyAnalysis format MethyGenoSet
Cancer
charm
minfi
methyAnalysis
Cancer
charm
minfi
methyAnalysis
11.4 years ago
Ed Schwalbe
▴ 20
0
votes
2
replies
1.3k
views
genoset:::initGenoSet
methyAnalysis
methyAnalysis
updated 11.4 years ago by
Pan Du
▴ 440 • written 11.4 years ago by
Schalkwyk, Leonard
▴ 20
0
votes
2
replies
1.8k
views
Loading Data into MethyAnalysis
Microarray
methyAnalysis
Microarray
methyAnalysis
updated 11.5 years ago by
Pan Du
▴ 440 • written 11.5 years ago by
Guest User
★ 13k
0
votes
1
reply
1.2k
views
methyAnalysis methyGenoSet function
methyAnalysis
methyAnalysis
updated 11.5 years ago by
Sean Davis
21k • written 11.5 years ago by
Giancarlo
▴ 10
0
votes
0
replies
1.2k
views
importing data problem with methyAnalysis package
Biophysics
Annotation
Preprocessing
annotate
lumi
methyAnalysis
Biophysics
Annotation
lumi
11.6 years ago
Pan Du
▴ 440
21 results • Page
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Replies
Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
Awards
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Popular Question
to
Lluís Revilla Sancho
▴ 730
Popular Question
to
maltethodberg
▴ 180
Scholar
to
Michael Love
42k
Popular Question
to
Leonardo Collado Torres
★ 1.1k
Scholar
to
Gordon Smyth
51k
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