Showing : methyAnalysis • reset
4
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Illumina MethylationEPIC vs. 450K
methylumi minfi illuminahumanmethylation450k.db 450k methyanalysis
updated 8.2 years ago by ▴ 740 • written 8.2 years ago by ▴ 50
2
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4
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Problem in installing Bioconductor packages due to "IRanges"
lumi methylumi methyAnalysis
6.3 years ago topijush ▴ 10
1
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9
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3.6k
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strange results from differential methylation analysis using limma
limma methylation methyanalysis IMA
updated 24 months ago by 21k • written 7.1 years ago by • 0
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5
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1.3k
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Understanding methyAnalysis Results
methyAnalysis methyanalysis methylation illuminahumanmethylation450k.db
updated 9.2 years ago by ▴ 80 • written 9.2 years ago by ▴ 370
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2
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1.4k
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Methylation data visualization using methyAnalysis with minfi
methylation microarray illumina minfi methyanalysis
updated 5.4 years ago by ★ 1.3k • written 5.4 years ago by • 0
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13
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2.2k
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MethylAid package visualize function not opening a web browser
illimina 450k methylation methyanalysis methylaid
8.6 years ago jdangelo • 0
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Conversion of minfi format MethylSet to methyAnalysis format MethyGenoSet
Cancer charm minfi methyAnalysis Cancer charm minfi methyAnalysis
11.2 years ago Ed Schwalbe ▴ 20
0
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8
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2.2k
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methyAnalysis for DMR identification
convert methyAnalysis convert methyAnalysis
updated 10.2 years ago by ▴ 160 • written 10.2 years ago by ★ 13k
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DMR identification: minfi speed, memory problems
Annotation convert minfi methyAnalysis bumphunter Annotation convert minfi methyAnalysis
10.2 years ago Allegra Petti ▴ 120
0
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4.1k
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methyAnalysis M values and Beta Values
methyAnalysis methyanalysis 450k
updated 9.2 years ago by ▴ 80 • written 9.2 years ago by ▴ 370
0
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1
reply
923
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problem with identifySigDMR command
methyAnalysis
7.8 years ago • updated 7.7 years ago yuping.zhang • 0
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0
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997
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methyAnalysis: heatmapByChromosome not works
methyAnalysis
7.6 years ago Shicheng Guo • 0
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0
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813
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Recurring error in smoothMethygenoset step for MethyAnalysis
methyanalysis
6.5 years ago charleneee95 • 0
0
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0
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725
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methyAnalysis - library(methyAnalysis) hangs when talking to Internet
methyanalysis
6.2 years ago mcahn • 0
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3.0k
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DMR identification: minfi speed, memory problems
Annotation convert minfi methyAnalysis bumphunter Annotation convert minfi methyAnalysis
updated 10.2 years ago by 65k • written 10.2 years ago by ★ 13k
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620
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Diffrential Gene expression in a group of specific methylated prometor patience
GeneExpression methyAnalysis MethylationArray
3.5 years ago coobzie • 0
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0
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1.7k
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methyAnalysis error with example data
methyanalysis
8.0 years ago Tom ▴ 10
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0
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1.2k
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importing data problem with methyAnalysis package
Biophysics Annotation Preprocessing annotate lumi methyAnalysis Biophysics Annotation lumi
11.3 years ago Pan Du ▴ 440
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1
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1.1k
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methyAnalysis methyGenoSet function
methyAnalysis methyAnalysis
updated 11.3 years ago by 21k • written 11.3 years ago by ▴ 10
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2
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Loading Data into MethyAnalysis
Microarray methyAnalysis Microarray methyAnalysis
updated 11.3 years ago by ▴ 440 • written 11.3 years ago by ★ 13k
0
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2
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genoset:::initGenoSet
methyAnalysis methyAnalysis
updated 11.2 years ago by ▴ 440 • written 11.2 years ago by ▴ 20
21 results • Page 1 of 1
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Replies
Answer: Trim/Filter out-of-bounds GRanges by Michael Love 41k
https://support.bioconductor.org/p/73432/#73448
Comment: Couldn't connect to server while using "pathways" by Michael Love 41k
You've put the tag "DESeq2" which results in an email to the maintainer, me, that I should respond to a post on the support site. Can you …
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Vincent J. Carey, Jr. 6.7k
btw that was run on M1 mac
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Vincent J. Carey, Jr. 6.7k
the test is not portable > aa <- aa_mutmat(acc = "MIYS930101", aaindex = "aaindex2") > str(aa) num [1:20, 1:20] 0.34 -0.0…
Comment: Method to find pathways different between 2 groups by Chris • 0
Sorry for not clear! Glad to know camera() is widely used. I just try to find papers use this method for learning purpose. Which gives more…
Votes
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: Method to find pathways different between 2 groups
Comment: Trying to use enrichGO
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Handling multiple differential expression comparisons
Awards • All
Popular Question to Vincent J. Carey, Jr. 6.7k
Scholar to ATpoint ★ 4.1k
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Popular Question to Sam ▴ 10
Popular Question to Gordon Smyth 50k
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