Bioconductor Methylationepic

Showing : methylationepic • reset

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methylationEPIC minfi microarray epigenetics EPIC

6.5 years ago firestar ▴ 20

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microarray methylationEPIC epigenetics minfi EPIC

6.5 years ago firestar ▴ 20

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ChAMP champ 2.9.10 methylationepic

7.5 years ago david.ch • 0

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rnbeads methylation methylationepic dna methylation

7.6 years ago gabrielrfries • 0

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champ methylationepic

updated 7.7 years ago by Yuan Tian ▴ 290 • written 7.7 years ago by csappleby-mallinder1 • 0

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ChAMP methylationepic epicarray epigenomics

updated 8.0 years ago by rcavalca ▴ 140 • written 8.0 years ago by karthikrpad ▴ 10

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minfi methylationepic illuminahumanmethylationepicanno.ilmn10b.hg19 SNP

8.2 years ago Ellen O • 0

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methylation illumina EPIC methylationepic idat

updated 8.4 years ago by Guido Hooiveld ★ 4.1k • written 8.4 years ago by Ellen O • 0

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methylation epic microarray minfi methylationepic

8.6 years ago nhejazi • 0

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shinymethyl minfi epic microarray methylationepic qualitycontrol

8.6 years ago chelsey.ju • 0

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minfi illumina methylationEPIC densityplot

8.7 years ago annabelle.congras ▴ 10

11 results • Page 1 of 1

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Comment: Sharing a collection of datasets in ExperimentHub by Peter Hickey ▴ 760

The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …

Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi by ReinholdGaylord99 • 0

Thank you so much! https://www.nature.com/articles/s41467-021-25960-2/ [geometry dash lite](https://geometrydashlite.online)

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by Gordon Smyth 53k

I'm not sure that I understand. You have a dataset that, even after pseudo-bulking, still has 6000 samples? That is surprising. Retaining …

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by abaed • 0

Hello again @gordonsmyth, I've now applied the analysis using a more detailed annotation of cell types/clusters, which includes about 100 …

Answer: Sharing a collection of datasets in ExperimentHub by shepherl 4.2k

107 packages would be a lot! It is certainly possible (and recommended) to implement one package that utilizes ExperimentHub for controlli…