Bioconductor Methylationepic

Showing : methylationepic • reset

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methylationEPIC minfi microarray epigenetics EPIC

5.9 years ago firestar ▴ 20

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965

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microarray methylationEPIC epigenetics minfi EPIC

5.9 years ago firestar ▴ 20

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2.4k

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ChAMP champ 2.9.10 methylationepic

6.9 years ago • updated 6.8 years ago david.ch • 0

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1.2k

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rnbeads methylation methylationepic dna methylation

6.9 years ago gabrielrfries • 0

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2.2k

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champ methylationepic

updated 7.0 years ago by Yuan Tian ▴ 290 • written 7.0 years ago by csappleby-mallinder1 • 0

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3.5k

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ChAMP methylationepic epicarray epigenomics

updated 7.4 years ago by rcavalca ▴ 140 • written 7.4 years ago by karthikrpad ▴ 10

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minfi methylationepic illuminahumanmethylationepicanno.ilmn10b.hg19 SNP

7.6 years ago Ellen O • 0

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2.3k

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methylation illumina EPIC methylationepic idat

updated 7.7 years ago by Guido Hooiveld ★ 4.1k • written 7.7 years ago by Ellen O • 0

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methylation epic microarray minfi methylationepic

7.9 years ago nhejazi • 0

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shinymethyl minfi epic microarray methylationepic qualitycontrol

8.0 years ago chelsey.ju • 0

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minfi illumina methylationEPIC densityplot

8.1 years ago annabelle.congras ▴ 10

11 results • Page 1 of 1

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Answer: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.0k

Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…

Answer: Restricting differential binding analysis to only TSS-proximal regions by Aaron Lun ★ 28k

Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…

Comment: Sample-specific methylation values using QSEA by User3088 • 0

Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…

Comment: input for singR function by iamin053 • 0

Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!

Comment: build samplesheet and plot profile by yf • 0

![enter image description here][1] [1]: /media/images/8ea93bd0-bc90-443d-a332-4701f54a

Votes

Unused arguments error without used arguments in GSVA?

Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte

A: Doubt about the "zero expression" genes or genes with no reads at all in the co

Answer: Unable to install nloptr

Answer: ensembldb for Homo Sapiens organism containing superfluous SYMBOL genes?

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