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noiseq
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1.3k
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Inquiring about Comparative Analysis without Replicates in NOIseq R Package
NOISeq
withoutreplicate
Noiseq
updated 2.4 years ago by
ATpoint
★ 5.0k • written 2.4 years ago by
Rutuja
• 0
1
vote
1
reply
1.2k
views
NOIseq Probability column
RNAseq
RNASeqData
NOISeq
3.6 years ago
Pratibha
▴ 10
0
votes
2
replies
1.4k
views
Differential expression on RNAseq without replicates
DESeq2
NOISeq
edgeR
updated 5.1 years ago by
ATpoint
★ 5.0k • written 5.1 years ago by
Themis
• 0
3
votes
6
replies
2.8k
views
deseq2 + filtering low counts with noiseq function
deseq2
noiseq
lowcounts
rnaseq
updated 4.0 years ago by
Michael Love
43k • written 5.3 years ago by
andreia
▴ 10
0
votes
1
reply
1.3k
views
How to arrange multiple plots into one page in NOISeq?
noiseq
RNA-seq
quality control
updated 20 months ago by
baptiste.bidon
• 0 • written 6.4 years ago by
Arindam
▴ 80
0
votes
0
replies
999
views
NOISeq 'readData' not writing correctly
software error
NOISeq
6.5 years ago
jledmondson
• 0
0
votes
1
reply
1.3k
views
Is possible to use NOISeq with counts from RSubread?
noiseq
rsubread
tophat
bowtie
bowtie2
6.6 years ago
Marcelo Laia
▴ 450
0
votes
0
replies
1.4k
views
Noiseqbio function (NOISEQ package)
noiseq
logfoldchange
7.7 years ago
Aurora
▴ 20
0
votes
0
replies
1.4k
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
8.0 years ago
aokoro
• 0
0
votes
0
replies
2.2k
views
Problem with heatmap by ComplexHeatmap
complexheatmap
Rstudio
NOISeq
8.3 years ago
Luiz
• 0
0
votes
3
replies
2.0k
views
Is the CPM filtering method from NOISeq unsupervised?
rnaseq
de analysis
gene filtering
noiseq
updated 8.4 years ago by
James W. MacDonald
68k • written 8.4 years ago by
Mau
▴ 50
0
votes
5
replies
4.8k
views
GC content and length bias correction with DESeq2 using cqn normalization factor matrix
deseq2
cqn
noiseq
updated 8.7 years ago by
Michael Love
43k • written 8.7 years ago by
glmazzo
▴ 10
0
votes
0
replies
1.6k
views
NOISeq error message while using ARSyNseq batch correction function
noiseq
batch effect
ARSyNseq
10.2 years ago
lina.faller
▴ 10
0
votes
0
replies
1.3k
views
Question: type of NOISeq package input file
RNASeq
NOISeq
RNASeq
NOISeq
12.9 years ago
Guest User
★ 13k
0
votes
2
replies
3.3k
views
NOISeq initialization problem
NOISeq
NOISeq
updated 13.3 years ago by
Dan Tenenbaum
★ 8.2k • written 13.3 years ago by
Guest User
★ 13k
0
votes
4
replies
2.5k
views
NOISeq installation error
NOISeq
NOISeq
updated 13.3 years ago by
Sean Davis
21k • written 13.3 years ago by
Fatemehsadat Seyednasrollah
▴ 260
0
votes
0
replies
1.4k
views
NOISeq-real input parameters
NOISeq
NOISeq
13.8 years ago
Guest User
★ 13k
17 results • Page
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Comment: Incosistencies in buildSNNGraph() function
by
ATpoint
★ 5.0k
Just played with this a bit and I think it comes down to not having a fixed seed before running the leiden thingy. Same goes for PCA and UM…
Answer: Incosistencies in buildSNNGraph() function
by
Aaron Lun
★ 29k
The most obvious thing that comes to mind is the RNG seed. `cluster_leiden()` does some random number generation, somewhere deep in the **i…
Comment: Opportunity to host EuroBioC2026 Preconference workshops!
by
TikTsokaas33ocissalpc
• 0
Thank you for sharing the EuroBioC2026 workshop opportunity. I m interested in hosting a hands on session teaching reproducible data analys…
Comment: Ensembl plants at annotationHub?
by
jwp48
• 0
Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!
Answer: Combining two proteomics datasets with limpa
by
Gordon Smyth
53k
Hi Andrew, We don't have that much experience combining different datasets with limpa yet, but my feeling is that the same DPC should be u…
Votes
Answer: Incosistencies in buildSNNGraph() function
Answer: Where do the filename come from in the LOLA datasets?
Bioconductor Maintainer Application
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limma moderated t-statistics and B-statistics
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