Bioconductor Noiseq

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NOISeq withoutreplicate Noiseq

updated 2.2 years ago by ATpoint ★ 4.9k • written 2.2 years ago by Rutuja • 0

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RNAseq RNASeqData NOISeq

3.3 years ago Pratibha ▴ 10

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DESeq2 NOISeq edgeR

updated 4.8 years ago by ATpoint ★ 4.9k • written 4.8 years ago by Themis • 0

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deseq2 noiseq lowcounts rnaseq

updated 3.7 years ago by Michael Love 43k • written 5.1 years ago by andreia ▴ 10

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noiseq RNA-seq quality control

updated 16 months ago by baptiste.bidon • 0 • written 6.1 years ago by Arindam ▴ 80

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software error NOISeq

6.3 years ago jledmondson • 0

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noiseq rsubread tophat bowtie bowtie2

6.3 years ago Marcelo Laia ▴ 450

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noiseq logfoldchange

7.5 years ago Aurora ▴ 20

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R noiseq data.frame

7.7 years ago aokoro • 0

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complexheatmap Rstudio NOISeq

8.1 years ago Luiz • 0

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1.9k

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rnaseq de analysis gene filtering noiseq

updated 8.2 years ago by James W. MacDonald 68k • written 8.2 years ago by Mau ▴ 50

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deseq2 cqn noiseq

updated 8.4 years ago by Michael Love 43k • written 8.4 years ago by glmazzo ▴ 10

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noiseq batch effect ARSyNseq

9.9 years ago lina.faller ▴ 10

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RNASeq NOISeq RNASeq NOISeq

12.6 years ago Guest User ★ 13k

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NOISeq NOISeq

updated 13.0 years ago by Dan Tenenbaum ★ 8.2k • written 13.0 years ago by Guest User ★ 13k

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NOISeq NOISeq

updated 13.0 years ago by Sean Davis 21k • written 13.0 years ago by Fatemehsadat Seyednasrollah ▴ 260

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NOISeq NOISeq

13.6 years ago Guest User ★ 13k

17 results • Page 1 of 1

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Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 4.9k

Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…

Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 4.9k

Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…

Comment: R course in Boston December 19-20 by eja.gaasa2e.r.m • 0

The upcoming XLSolutions R course in Boston on December 19 20 is a great opportunity to enhance your data skills. Whether you re a beginner…

Answer: Gatins Set error by James W. MacDonald 68k

`GatingSet` isn't a function in `flowCore`. It is however in `flowWorkspace`, which you would need to load first.

Answer: How to model DE for RNA-seq in concordant monozygotic twins? by Gordon Smyth 53k

Your question is more about science than it is about software syntax, and I can't give advice about how to conduct a scientific analysis, n…

Votes

Comment: incomplete imputation of missing values with LEA impute() function

Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce

Answer: ordinary t from limma [was: How would I normally compare swirl?]

Comment: readDNAStringSet with non DNA characters

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design

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