Bioconductor S4

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genomicranges grangeslist granges s4

updated 2.1 years ago by Hervé Pagès 16k • written 8.0 years ago by richierocks ▴ 40

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5.2k

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updated 9.1 years ago by Michael Lawrence ★ 11k • written 9.1 years ago by Koen Van den Berge ▴ 180

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1000

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s4 generic

updated 5.3 years ago by Marcel Ramos 700 • written 5.3 years ago by Michael Steinbaugh ▴ 90

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2.7k

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lumi S4

9.2 years ago Chi Hong • 0

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1.2k

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s4 coercion iranges integerlist

7.8 years ago jian_liangli • 0

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s4 dataframe left_join merge

updated 5.1 years ago by Hervé Pagès 16k • written 5.1 years ago by Michael Steinbaugh ▴ 90

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S4 packages

updated 5.8 years ago by Michael Lawrence ★ 11k • written 5.8 years ago by lukaszbednarz ▴ 10

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s4 methods SummarizedExperiment

updated 5.3 years ago by Aaron Lun ★ 28k • written 5.3 years ago by brendan.innes ▴ 20

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1.1k

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iranges integerlist s4

7.8 years ago Jurat Shahidin ▴ 80

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663

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class S4

updated 4.2 years ago by Hervé Pagès 16k • written 4.2 years ago by Teun van den Brand • 0

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803

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calcium imaging imaging s4

updated 4.1 years ago by shepherl 3.9k • written 4.1 years ago by muad.abdelhay ▴ 10

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733

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S4 deseq2

updated 5.3 years ago by swbarnes2 ★ 1.4k • written 5.3 years ago by shintzen • 0

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DBI S4 Biobase

updated 21 months ago by Hervé Pagès 16k • written 21 months ago by sandmann.t ▴ 70

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rnbeads error as.vector(data) s4vectors s4

8.7 years ago schasse • 0

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mclust s4vectors S4 as.matrix .FCS

7.9 years ago anara92 • 0

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devtools S4 methods cache

5.5 years ago Michael Steinbaugh ▴ 90

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865

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S4 Rcpp InteractionSet IRanges Rle

updated 3.9 years ago by Aaron Lun ★ 28k • written 3.9 years ago by lklei001 • 0

17 results • Page 1 of 1

Recent ...

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Answer: Errors in chromosome annotation-biomaRt by James W. MacDonald 65k

If you are just using HGNC symbols for the lookup, and you are trying to get NCBI IDs, then I wouldn't use `biomaRt` because it's based on …

Comment: Help with ENmix readidat by James W. MacDonald 65k

Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …

Comment: LRT, more than two conditions and pairwise comparisons by James W. MacDonald 65k

In that case, probably easiest to subset to the groups being compared.

Comment: Help with ENmix readidat by minardsmitha ▴ 10

Did you figure this out? I have the same issue.

Comment: LRT, more than two conditions and pairwise comparisons by boczniak767 ▴ 720

Thank you for response, apparently I still don't know much about statistics. In fact I want to campare time-profiles [and the LRT has been …

Votes

Comment: DESeq2- Mysterious interaction suppresses DEGs

Answer: DESeq2- Mysterious interaction suppresses DEGs

Answer: Subsetting RNAseq data | voomaByGroup()

biomaRt not working - lazy table error

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

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