Showing : sample size • reset
0
votes
4
replies
906
views
DESeq2: Small treatment group, large control group
deseq2 sample size
updated 5.5 years ago by 42k • written 5.5 years ago by • 0
3
votes
6
replies
1.4k
views
nbinomLRT function all cores usage
deseq2 nbinomLRT sample size biocparallel
updated 5.6 years ago by ▴ 950 • written 5.6 years ago by • 0
4
votes
5
replies
2.2k
views
sample size determination in microarrays studies with limma analysis
limma sample size microarrays statistical power
6.2 years ago eleonoregravier ▴ 70
0
votes
0
replies
1.6k
views
ATAC-seq: Sample size when pooling sample reads to call peaks
atac-seq sample size Peak Normalize
6.4 years ago jaime.alvarez.benayas • 0
0
votes
9
replies
4.9k
views
DESeq2 unequal sample sizes
deseq2 deseq sample size
6.7 years ago MrHodor • 0
3
votes
3
replies
1.6k
views
csaw: how does unequal sample size affect filtering filterWindows step
csaw differential binding analysis sample size independent filtering statistical power
updated 6.8 years ago by ★ 28k • written 6.8 years ago by • 0
4
votes
1
reply
1.8k
views
Very low EdgeR Pvalues with very small sample size
edger pvalue sample size
updated 8.0 years ago by ★ 28k • written 8.0 years ago by ▴ 40
0
votes
5
replies
2.3k
views
getting sample size for RNAseq experiment
rnaseqpower sspa sample size sequencing complex-design
updated 8.3 years ago by ▴ 20 • written 8.3 years ago by • 0
8
votes
17
replies
15k
views
WGCNA for RNA-Seq Sample Set, Outliers, and Spearman correlation
WGCNA Sample Size Outliers
updated 8.8 years ago by • 0 • written 9.3 years ago by ▴ 150
9 results • Page 1 of 1
Recent ...
Replies
Comment: gds in GEOmetadb 2023-06-26 version is empty by Frederico Moraes Ferreira ▴ 100
Try axel -n 20 https://gbnci.cancer.gov/geo/GEOmetadb.sqlite.gz
Comment: Most enriched pathway is not expressed when modifying universe parameter by James W. MacDonald 66k
The default for `enrichGO` is to subset to those with a p-value<0.05. You don't adjust that default argument, so you shouldn't have any GO …
Answer: In a 3 group DEG analysis with three batches, can I use 1 group in all three bat by Michael Love 42k
You can compare A and C thanks to the sharing of samples from B across 1, 2 and 3.
Comment: Most enriched pathway is not expressed when modifying universe parameter by adripel • 0
In the enrichGO results we have significant and non-significant enriched terms that are displayed. So why would an enriched term (significa…
Answer: Design formula, numeric contrast, and lfcshrink in deseq2 by Michael Love 42k
For questions about how to construct the correct contrasts correspond to particular hypotheses, I recommend consulting with a local statist…
Votes
Comment: Most enriched pathway is not expressed when modifying universe parameter
Time-course, comparison of two groups
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
Answer: GESA with certain gene list returns no result with human genom, but many result
Answer: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
Awards • All
Popular Question to swbarnes2 ★ 1.4k
Popular Question to Stephanie M. Gogarten ▴ 870
Popular Question to Jonathan ▴ 10
Popular Question to Frederico Moraes Ferreira ▴ 100
Popular Question to richardallenfriedmanbrooklyn ▴ 20
Locations • All
United Kingdom, 30 minutes ago
The city by the bay, 1 hour ago
San Diego, 2 hours ago
WEHI, Melbourne, Australia, 2 hours ago
Canada, 3 hours ago
Traffic: 363 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6