Showing : Cytoscape • reset
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Going back to default settings in RCy3
Cytoscape RCy3 RCy
updated 20 months ago by ▴ 30 • written 21 months ago by ▴ 90
3
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7
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2.4k
views
"Degree values are the same for all nodes in a network imported from WGCNA to Cytoscape using RCy3. Seeking insights and potential causes."
Cytoscape RCy3 Networkvisualization WGCNA
2.4 years ago Ortega-C ▴ 10
0
votes
0
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1.5k
views
WGCNA Heatmap and Export to Cytoscape Not Working
Cytoscape Heatmap heatmaps WGCNA
2.6 years ago gianni.drm • 0
0
votes
1
reply
1.1k
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Importing Newick trees in Cytoscape by conversion to igraph via RCy3
RCy3 Cytoscape R Newick Bioconductor
updated 4.8 years ago by ▴ 30 • written 5.2 years ago by • 0
3
votes
4
replies
1.9k
views
Exporting graphNEL into Cytoscape using RCy3 fails with 'arguments imply differing number of rows'
RCy3 Cytoscape Rgraphviz GOstats
6.4 years ago Matthew Thornton ▴ 380
1
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0
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2.4k
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Exploring upstream regulators (transcription factors, drugs, etc) of transcripts in R
microarray bioconductor cytoscape mapfromtranscripts
6.9 years ago lm795 ▴ 10
0
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0
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1.5k
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Help with generating network from gene expression data
gene expression network cytoscape
7.7 years ago torgeirous • 0
6
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8
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10k
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WGCNA export to cytoscape
wgcna cytoscape
updated 7.7 years ago by ▴ 60 • written 8.4 years ago by ▴ 60
0
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1
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1.7k
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WGNA export to external software
WGCNA network visualization external software cytoscape
updated 8.0 years ago by ★ 3.0k • written 8.0 years ago by • 0
9 results • Page 1 of 1
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Comment: EuroBioC2024 abstract submission is open! by leoblevins38 • 0
The difficulty of the game [Space Waves][1] gradually rises as it goes on. In order to help players become accustomed to the rhythm, early …
Answer: Sharing a collection of datasets in ExperimentHub by shepherl 4.2k
107 packages would be a lot! It is certainly possible (and recommended) to implement one package that utilizes ExperimentHub for controlli…
Comment: GO.db and others package Download failure by James W. MacDonald 68k
Also, you never need to use anything but `BiocManager::install` to install any package, which has the beneficial side effect of ensuring th…
Comment: GO.db and others package Download failure by James W. MacDonald 68k
Yes. Your packages have odd Y version numbers (where the version is X.Y.Z). That means they are devel packages (release versions have even …
Comment: GO.db and others package Download failure by Skyler • 0
Am I using Bioc-devel?
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Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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