Showing : Cytoscape • reset
1
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Going back to default settings in RCy3
Cytoscape RCy3 RCy
updated 22 months ago by ▴ 30 • written 22 months ago by ▴ 90
3
votes
7
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2.4k
views
"Degree values are the same for all nodes in a network imported from WGCNA to Cytoscape using RCy3. Seeking insights and potential causes."
Cytoscape RCy3 Networkvisualization WGCNA
2.5 years ago Ortega-C ▴ 10
0
votes
0
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1.5k
views
WGCNA Heatmap and Export to Cytoscape Not Working
Cytoscape Heatmap heatmaps WGCNA
2.7 years ago gianni.drm • 0
0
votes
1
reply
1.1k
views
Importing Newick trees in Cytoscape by conversion to igraph via RCy3
RCy3 Cytoscape R Newick Bioconductor
updated 4.9 years ago by ▴ 30 • written 5.3 years ago by • 0
3
votes
4
replies
2.0k
views
Exporting graphNEL into Cytoscape using RCy3 fails with 'arguments imply differing number of rows'
RCy3 Cytoscape Rgraphviz GOstats
6.5 years ago Matthew Thornton ▴ 380
1
vote
0
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2.4k
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Exploring upstream regulators (transcription factors, drugs, etc) of transcripts in R
microarray bioconductor cytoscape mapfromtranscripts
7.0 years ago lm795 ▴ 10
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0
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1.5k
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Help with generating network from gene expression data
gene expression network cytoscape
7.8 years ago torgeirous • 0
6
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8
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11k
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WGCNA export to cytoscape
wgcna cytoscape
updated 7.8 years ago by ▴ 60 • written 8.5 years ago by ▴ 60
0
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1
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1.7k
views
WGNA export to external software
WGCNA network visualization external software cytoscape
updated 8.1 years ago by ★ 3.0k • written 8.1 years ago by • 0
9 results • Page 1 of 1
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Comment: Highly DE genes but small count difference within conditions by shy.hippopotamus.yxmb • 0
Monkey Mart: The Ultimate Gaming Marketplace Experience https://monkeymart.one/
Comment: Highly DE genes but small count difference within conditions by shy.hippopotamus.yxmb • 0
Enter the world of Monkey Mart, where gaming meets innovation. We've created a cutting-edge marketplace that's transforming how gamers trad…
Comment: Highly DE genes but small count difference within conditions by shy.hippopotamus.yxmb • 0
Enter the world of , where gaming meets innovation. We've created a cutting-edge marketplace that's transforming how gamers trade and conne…
Comment: copy number/LOH for Affy 100K by igkryycpinmshzugby • 0
Hi John For copy number and LOH analysis from Affymetrix 100K SNP arrays you can use aroma.affymetrix or CRLMM packages in Bioconductor. …
Comment: Integration: Paired-end vs healthy single-end from a different source by igkryycpinmshzugby • 0
Yes, Option 1 (technical homogenization) reprocessing paired-end samples as single-end using only R1 is the most defensible approach when l…
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Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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