Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Cytoscape
•
reset
1
vote
1
reply
446
views
Going back to default settings in RCy3
Cytoscape
RCy3
RCy
updated 11 months ago by
alex.pico
▴ 30 • written 12 months ago by
David R
▴ 90
3
votes
7
replies
1.8k
views
"Degree values are the same for all nodes in a network imported from WGCNA to Cytoscape using RCy3. Seeking insights and potential causes."
Cytoscape
RCy3
Networkvisualization
WGCNA
19 months ago
Ortega-C
▴ 10
0
votes
0
replies
1.2k
views
WGCNA Heatmap and Export to Cytoscape Not Working
Cytoscape
Heatmap
heatmaps
WGCNA
22 months ago
gianni.drm
• 0
0
votes
1
reply
902
views
Importing Newick trees in Cytoscape by conversion to igraph via RCy3
RCy3
Cytoscape
R
Newick
Bioconductor
updated 4.0 years ago by
alex.pico
▴ 30 • written 4.4 years ago by
ellisjc
• 0
3
votes
4
replies
1.6k
views
Exporting graphNEL into Cytoscape using RCy3 fails with 'arguments imply differing number of rows'
RCy3
Cytoscape
Rgraphviz
GOstats
5.6 years ago
Matthew Thornton
▴ 380
1
vote
0
replies
2.0k
views
Exploring upstream regulators (transcription factors, drugs, etc) of transcripts in R
microarray
bioconductor
cytoscape
mapfromtranscripts
6.2 years ago
lm795
▴ 10
0
votes
0
replies
1.2k
views
Help with generating network from gene expression data
gene expression
network
cytoscape
6.9 years ago
torgeirous
• 0
6
votes
8
replies
9.4k
views
WGCNA export to cytoscape
wgcna
cytoscape
updated 6.9 years ago by
harelarik
▴ 60 • written 7.6 years ago by
2323982403
▴ 60
0
votes
1
reply
1.5k
views
WGNA export to external software
WGCNA
network visualization
external software
cytoscape
updated 7.2 years ago by
Peter Langfelder
★ 3.0k • written 7.2 years ago by
je.maxfield
• 0
9 results • Page
1 of 1
Recent ...
Replies
Comment: Error in get_anno_data(ontology) : ontology not supported yet...
by
GODseeker
• 0
thank u so much ,god bless u,my dear friend.
Comment: Feature Counts - potential bug with outfile.jcounts
by
chris2.a.white
• 0
Hi @gordonsmyth and @weishi, Firstly, thank you for offering your time to develop the junction quantification module further. This is gre…
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
by
xiaofeiwang198266
• 0
Hi Tim, Thanks for your reply! Yes, my data is 450K, and it is TCGA methylation data downloaded by TCGAbiolinks. The problem is that I can …
Answer: Error in get_anno_data(ontology) : ontology not supported yet...
by
Guido Hooiveld
★ 4.1k
Did you check the help page for the function `enrichDO`? Type `?enrichDO`. I am asking, because there it is stated that the argument `ont`…
Comment: Build error on kunpeng2 Linux aarch64
by
martin.grigorov
▴ 10
Hi, There was a problem with `icu` and because of that the (r)curl library was not installed. The system/OS curl library is one version ol…
Votes
Comment: Feature Counts - potential bug with outfile.jcounts
Answer: Feature Counts - potential bug with outfile.jcounts
Comment: Can we get beta values with DMRcate package
Answer: Can we get beta values with DMRcate package
DiffBind giving different results from dba.report() and dba.analyze(..., bRetrieveAnalysis=TRUE)
Awards
• All
Popular Question
to
martin.grigorov
▴ 10
Scholar
to
James W. MacDonald
67k
Popular Question
to
Benjamin
▴ 20
Popular Question
to
María Calvo
• 0
Popular Question
to
Gordon Smyth
52k
Locations
• All
United States,
just now
France,
2 minutes ago
Switzerland,
7 minutes ago
Finland,
28 minutes ago
The city by the bay,
42 minutes ago
Traffic: 893 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6