Bioconductor DNA Methylation

Showing : DNA Methylation • reset

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1.2k

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minfi cell proportion estimateCellCounts DNA Methylation

5.0 years ago grayapply2009 • 0

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2.6k

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normalization DNA methylation WGCNA

updated 5.7 years ago by Peter Langfelder ★ 3.0k • written 5.7 years ago by enora.fremy • 0

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1.2k

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medips medip-seq dna methylation dmr analysis

updated 6.3 years ago by Lukas Chavez ▴ 570 • written 6.3 years ago by mtefit • 0

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1.9k

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R gdc rna-seq dna methylation

updated 6.4 years ago by Sean Davis 21k • written 6.4 years ago by RichardJActon ▴ 50

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1.6k

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minfi normalization outliers dna methylation densityplot

6.6 years ago peter.fransquet • 0

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914

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differential variability dna methylation iEVORA DVP

6.8 years ago poojitha.stemcell ▴ 10

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1.2k

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rnbeads methylation methylationepic dna methylation

7.0 years ago gabrielrfries • 0

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1.3k

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dna methylation biseq

updated 7.2 years ago by Gordon Smyth 52k • written 7.2 years ago by ahmad.moousavi • 0

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2.2k

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tcgabiolinks dna methylation

updated 7.3 years ago by Marcel Ramos 700 • written 7.3 years ago by michaelwxf2012 • 0

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2.1k

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dna methylation illimina 450k methylation beta M significance

updated 7.4 years ago by James W. MacDonald 68k • written 7.4 years ago by skids121 • 0

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1.4k

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CNV minfi preprocessing dna methylation

7.9 years ago Thomas • 0

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1.2k

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microarray HM450 dna methylation cohcap

updated 8.1 years ago by James W. MacDonald 68k • written 8.1 years ago by poojitha.stemcell ▴ 10

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1.3k

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minfi bumphunter DNA methylation illumina450k

updated 8.7 years ago by James W. MacDonald 68k • written 8.7 years ago by fleur_p90 • 0

13 results • Page 1 of 1

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Answer: library org.Hs.eg.db failing to install by James W. MacDonald 68k

It should just install. ``` > library(BiocManager) Bioconductor version 3.20 (BiocManager 1.30.25), R 4.4.1 (2024-06-14 ucrt) W…

Comment: Surprising behavior for DEXseq dispersion estimate plot? by Elijah • 0

Thank you so much for your quick reply! I was worried if some underlying technical artifact or unusual behavior would be causing the patter…

Answer: Surprising behavior for DEXseq dispersion estimate plot? by Michael Love 43k

The red points are just slowly moving toward -Inf. They tend to have variance < mean (if it were a simple design and you could just look at…

Answer: DESeq use in lipidomic analysis by Michael Love 43k

I would go for limma rather than a NB-based method. See the papers on limma for metabolomics / proteomics.

Answer: DiffBind - question on the use of filtered or unfiltered input data by robert • 0

[FFH4X][1] Injector is a Free Fire mod menu software that includes a variety of intriguing hack features such as aimbot, auto headshot, fly…

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Answer: Surprising behavior for DEXseq dispersion estimate plot?

Calculating TOM in blockwise WGCNA

A: What is the "linear model" part used for in Limma?

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Popular Question to ramiro.barrantes ▴ 10