Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
DNA methylation
•
reset
0
votes
1
reply
1.4k
views
Estimate cell proportion from beta values using minfi estimateCellCounts?
minfi
cell proportion
estimateCellCounts
DNA Methylation
5.7 years ago
grayapply2009
• 0
1
vote
2
replies
3.1k
views
WGCNA on methylation data
normalization
DNA methylation
WGCNA
updated 6.5 years ago by
Peter Langfelder
★ 3.0k • written 6.5 years ago by
enora.fremy
• 0
1
vote
2
replies
1.4k
views
Comparing more than 2 experimental groups with MEDIPS?
medips
medip-seq
dna methylation
dmr analysis
updated 7.0 years ago by
Lukas Chavez
▴ 570 • written 7.0 years ago by
mtefit
• 0
7
votes
7
replies
2.3k
views
Using GenomicDataCommons R package to identify cases with both DNA methylation and gene expression data
R
gdc
rna-seq
dna methylation
updated 7.1 years ago by
Sean Davis
21k • written 7.1 years ago by
RichardJActon
▴ 50
1
vote
2
replies
2.0k
views
Odd Sample after SWAN normalisation, DNA methylation analysis EPIC array
minfi
normalization
outliers
dna methylation
densityplot
7.4 years ago
peter.fransquet
• 0
0
votes
0
replies
1.0k
views
iEVORA wrapping up error
differential variability
dna methylation
iEVORA
DVP
7.6 years ago
poojitha.stemcell
▴ 10
0
votes
0
replies
1.4k
views
differential methylation analysis with RnBeads
rnbeads
methylation
methylationepic
dna methylation
7.8 years ago
gabrielrfries
• 0
0
votes
1
reply
1.5k
views
Problem in working with BiSeq - BSraw
dna methylation
biseq
updated 8.0 years ago by
Gordon Smyth
53k • written 8.0 years ago by
ahmad.moousavi
• 0
2
votes
5
replies
2.5k
views
Error when prepare the TCGAdata
tcgabiolinks
dna methylation
updated 8.0 years ago by
Marcel Ramos
700 • written 8.0 years ago by
michaelwxf2012
• 0
1
vote
1
reply
2.5k
views
Beta Value Analysis - DNA Methylation Dataset
dna methylation
illimina 450k methylation
beta
M
significance
updated 8.2 years ago by
James W. MacDonald
68k • written 8.2 years ago by
skids121
• 0
0
votes
0
replies
1.7k
views
DNA methylation 450k data - minfi - preprocessFunnorm - CNV cases vs non-CNV controls
CNV
minfi
preprocessing
dna methylation
8.7 years ago
Thomas
• 0
1
vote
2
replies
1.4k
views
Correlating DNA methylation and Illumina gene expression microarray data
microarray
HM450
dna methylation
cohcap
updated 8.9 years ago by
James W. MacDonald
68k • written 8.9 years ago by
poojitha.stemcell
▴ 10
0
votes
1
reply
1.5k
views
error when using bumphunter package with illumina 450k data
minfi
bumphunter
DNA methylation
illumina450k
updated 9.5 years ago by
James W. MacDonald
68k • written 9.5 years ago by
fleur_p90
• 0
13 results • Page
1 of 1
Recent ...
Replies
Comment: Bioinformatician at the Lausanne University Hospital
by
eja.ger.m
• 0
For individuals looking to improve communication and collaboration in demanding medical or research environments like the Genetic Medicine …
Answer: NUPOP usage
by
shepherl
4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker?
by
fnfgame
• 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Awards
• All
Popular Question
to
Lluís Revilla Sancho
▴ 760
Popular Question
to
James W. MacDonald
68k
Popular Question
to
shepherl
4.2k
Popular Question
to
Gordon Smyth
53k
Commentator
to
sina.nassiri
▴ 130
Locations
• All
United States,
22 minutes ago
United States,
1 hour ago
United States,
1 hour ago
The city by the bay,
1 hour ago
United States,
1 hour ago
Traffic: 1342 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6