Showing : HtqPCR • reset
1
vote
5
replies
591
views
Manual creation of qPCRset does not work
bug nondetects HTqPCR
updated 6 months ago by • 0 • written 7 months ago by ▴ 230
0
votes
3
replies
389
views
Technical Replicates in HTqPCR
HTqPCR
written 7 months ago by ▴ 230
0
votes
0
replies
610
views
How to perform a cluster analysis in RT-qPCR or HT-qPCR results?
cluster qpcr qpcrNorm clusterProfiler HTqPCR
18 months ago Javier • 0
0
votes
0
replies
559
views
Made a pDATA manually for HTqPCR procedure
HTqPCR phenoData esetVis pData
2.5 years ago Marcelo Laia ▴ 450
0
votes
0
replies
512
views
Error when reading qPCR data in SDS format
HTqPCR
3.1 years ago Nghia • 0
3
votes
4
replies
3.0k
views
Using limma for the analysis of qPCR data
NormqPCR EasyqpcR qPCR HTqPCR limma
updated 2.5 years ago by ▴ 380 • written 3.3 years ago by ▴ 660
0
votes
0
replies
518
views
Problems creating qPCRset from RT2 array data with HTqPCR package
HTqPCR
3.8 years ago Maximilian Fuchs • 0
0
votes
0
replies
479
views
HTqPCR package, filterCategory function
HTqPCR filterCategory setCategory
updated 4.3 years ago by 65k • written 4.3 years ago by • 0
0
votes
0
replies
727
views
Sample grouping (phenoData) and visualization in R package- HtqPCR
HtqPCR grouping visualization R phenoData
4.7 years ago mohammedtoufiq91 ▴ 10
0
votes
0
replies
615
views
Analyze ct data using HTqPCR
HTqPCR R NormqPCR
4.8 years ago annesha • 0
0
votes
0
replies
506
views
Error with HTqPCR rbind
HTqPCR
4.9 years ago NAIARA GARCÍA ▴ 10
0
votes
1
reply
859
views
HTqPCR: dealing with technical replicates (filterCategory) and inability to analyze datasets with filtered genes (limmaCtData).
limma htqpcr
updated 3.3 years ago by • 0 • written 5.3 years ago by • 0
0
votes
0
replies
629
views
A problem about changeCtLayout in HTqPCR
htqpcr
5.3 years ago tropicalis • 0
0
votes
3
replies
970
views
Creation of qPCRset in R for HtqPCR
R bioconductor htqpcr qpcrset object
5.6 years ago mohammedtoufiq91 ▴ 10
0
votes
0
replies
733
views
Creating qPCRset object from Bio-Rad CFX file
htqpcr limma
5.6 years ago dbars • 0
0
votes
0
replies
858
views
HTqPCR - unable to create a 'qPCRset' object
htqpcr expressionset
5.8 years ago jirkanov • 0
0
votes
0
replies
789
views
Inter-run calibration in HTqPCR R package
htqpcr R
5.9 years ago dbarscortina • 0
0
votes
0
replies
916
views
Import problem with HTqPCR Fluidigm 96.96
htqpcr bioconductor fluidigm biomark
6.2 years ago reed27 • 0
0
votes
0
replies
819
views
HTqPCR for Fluidigm Results
htqpcr fluidigm
6.2 years ago rhonce • 0
0
votes
0
replies
820
views
HTqPCR trouble with changeCtLayout
htqpcr qPCR
6.2 years ago samantha_jeschonek • 0
2
votes
2
replies
1.0k
views
Reading in delta Ct values using HTqPCR
htqpcr
updated 6.2 years ago by 50k • written 6.2 years ago by ▴ 10
0
votes
0
replies
720
views
Bugs in HTqPCR 1.30.0?
htqpcr
6.5 years ago h.roest • 0
1
vote
2
replies
1.3k
views
No differential expression with limmaCtData possible
limma htqpcr
6.5 years ago h.roest • 0
0
votes
0
replies
748
views
HTqPCR package: problems with the limmaCtData function
htqpcr
6.8 years ago Frederico Moraes Ferreira ▴ 100
0
votes
1
reply
996
views
Problem duplicated samples for ChangeCtLayout in HTqPCR with fluidigm 96*96
htqpcr
7.0 years ago carine.genet • 0
0
votes
0
replies
845
views
re-format data for HtqPCR
HtqPCR reshape
7.2 years ago Stefany Solano • 0
0
votes
0
replies
875
views
Batch Correction in HTqPCR?
qPCR htqpcr
7.3 years ago bradley • 0
0
votes
3
replies
1.3k
views
HTqPCR does not copy featureData when subsetting a qPCRset
htqpcr
updated 7.2 years ago by • 0 • written 7.3 years ago by ▴ 40
0
votes
1
reply
1.1k
views
HTqPCR cannot read more recent SDS files
htqpcr
updated 7.2 years ago by • 0 • written 7.3 years ago by ▴ 40
3
votes
7
replies
2.1k
views
Subsetting qPCRset loses sample names, possibly due to change of assayDataElementReplace
HTqPCR
7.3 years ago henrik.seidel ▴ 40
0
votes
1
reply
1.2k
views
HTqPCR: bug in subsetting qPCRset
HTqPCR htqpcr subsetting
updated 7.3 years ago by ▴ 40 • written 7.5 years ago by ★ 3.9k
3
votes
1
reply
1.4k
views
Errors with HTqPCR v1.28.0 and BioC 3.4
HTqPCR
updated 7.3 years ago by ▴ 40 • written 7.5 years ago by ▴ 20
0
votes
0
replies
814
views
HTqPCR - Multiple plates for multiple samples
htqpcr
7.6 years ago Angela LR • 0
0
votes
0
replies
935
views
HTqPCR limma decide test issue?
limma decide test HTqPCR
7.6 years ago polemiraza ▴ 70
0
votes
0
replies
745
views
setCategory flag and flag.pout argument problems
htqpcr
7.6 years ago h.roest • 0
0
votes
0
replies
1.0k
views
Combining TLDA cards for normalization
normalization microrna htqpcr
7.8 years ago jamie_jabalee • 0
1
vote
0
replies
2.0k
views
HTqPCR readCtData 12 samples x 63 genes - error: row names supplied are of the wrong length
HTqPCR readCtData Heidi Dvinge
8.0 years ago virginia.claudio ▴ 10
0
votes
0
replies
1.1k
views
Error in readCtData
htqpcr readctdata connection readlines
8.1 years ago lizhensor • 0
0
votes
0
replies
932
views
Help with loading Data and reading Ct values
htqpcr
8.2 years ago Pheebz • 0
1
vote
1
reply
1.3k
views
HTQPCR - create qPCR set from a matrix of CT values
HTqPCR
updated 3.3 years ago by 50k • written 8.4 years ago by ▴ 40
0
votes
1
reply
1.2k
views
featureNames converted to numbers in limmaCtData
limma htqpcr
8.7 years ago julio.c.silver • 0
1
vote
7
replies
1.7k
views
limmaCTData Error requires ndups=2 even when there are no duplicate genes (should be ndups=1)
limma ndups htqpcr software error
updated 8.7 years ago by 50k • written 8.7 years ago by • 0
0
votes
0
replies
1.5k
views
Problems importing (new) LightCycler data to HTqPCR
htqpcr dataimport
9.0 years ago H.H. • 0
0
votes
2
replies
1.2k
views
HTqPCR + setting flags as unreliable problem
htqpcr flags setCategory
9.4 years ago samantha.smith-4 • 0
0
votes
1
reply
1.4k
views
Possible bug in setCategory function from HTqPCR package
htqpcr HTqPCR
updated 7.6 years ago by • 0 • written 9.4 years ago by ▴ 830
0
votes
0
replies
1.0k
views
Bugs in HTqPCR implementation of data normalization
Normalization HTqPCR Normalization HTqPCR
9.8 years ago Peter Langfelder ★ 3.0k
0
votes
0
replies
2.1k
views
reading qRT-PCR data
ddCt HTqPCR ReadqPCR ddCt HTqPCR ReadqPCR
10.0 years ago Guest User ★ 13k
0
votes
5
replies
1.5k
views
Reading in mutiple files using readCtData
HTqPCR HTqPCR
updated 10.2 years ago by 65k • written 10.2 years ago by ▴ 50
2
votes
1
reply
1.3k
views
HTqPCR- gene names not maintained in limmaCtData
annotate ddCt HTqPCR annotate ddCt HTqPCR
10.2 years ago Cornwell, Adam ▴ 110
0
votes
4
replies
1.4k
views
HTqPCR normalization issues - third posting
Normalization HTqPCR Normalization HTqPCR
updated 10.5 years ago by ★ 1.1k • written 10.5 years ago by ▴ 330
50 results • Page 1 of 1
Recent ...
Replies
Answer: limma Intercept vs No-intercept models completely changing DMR results? by Gordon Smyth 50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results? by James W. MacDonald 65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2 by Kim • 0
Thank you Tim, this is a great help in getting me started!
Comment: Too many significant genes when integrating gtex and tcga by Michael Love 41k
Yes, this was one of the aspects we highlighted in the 2014 paper, and it's also in the workflow. Check these places first. Also take a st…
Votes
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
Awards • All
Popular Question to Gordon Smyth 50k
Popular Question to Zainab • 0
Popular Question to Theo ▴ 10
Popular Question to gene_bioconductor ▴ 10
Popular Question to rohitsatyam102 ▴ 20
Locations • All
France, 12 minutes ago
WEHI, Melbourne, Australia, 25 minutes ago
San Diego, 30 minutes ago
United Kingdom, 56 minutes ago
United States, 2 hours ago
Traffic: 540 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6