Showing : HtqPCR • reset
1
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5
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611
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Manual creation of qPCRset does not work
bug nondetects HTqPCR
updated 6 months ago by • 0 • written 7 months ago by ▴ 230
0
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3
replies
400
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Technical Replicates in HTqPCR
HTqPCR
written 8 months ago by ▴ 230
0
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0
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620
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How to perform a cluster analysis in RT-qPCR or HT-qPCR results?
cluster qpcr qpcrNorm clusterProfiler HTqPCR
18 months ago Javier • 0
0
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0
replies
571
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Made a pDATA manually for HTqPCR procedure
HTqPCR phenoData esetVis pData
2.6 years ago Marcelo Laia ▴ 450
0
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0
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521
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Error when reading qPCR data in SDS format
HTqPCR
3.1 years ago Nghia • 0
3
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4
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3.1k
views
Using limma for the analysis of qPCR data
NormqPCR EasyqpcR qPCR HTqPCR limma
updated 2.6 years ago by ▴ 380 • written 3.3 years ago by ▴ 660
0
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0
replies
524
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Problems creating qPCRset from RT2 array data with HTqPCR package
HTqPCR
3.9 years ago Maximilian Fuchs • 0
0
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0
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484
views
HTqPCR package, filterCategory function
HTqPCR filterCategory setCategory
updated 4.4 years ago by 65k • written 4.4 years ago by • 0
0
votes
0
replies
739
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Sample grouping (phenoData) and visualization in R package- HtqPCR
HtqPCR grouping visualization R phenoData
4.7 years ago mohammedtoufiq91 ▴ 10
0
votes
0
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621
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Analyze ct data using HTqPCR
HTqPCR R NormqPCR
4.9 years ago annesha • 0
0
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0
replies
514
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Error with HTqPCR rbind
HTqPCR
5.0 years ago NAIARA GARCÍA ▴ 10
0
votes
1
reply
863
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HTqPCR: dealing with technical replicates (filterCategory) and inability to analyze datasets with filtered genes (limmaCtData).
limma htqpcr
updated 3.3 years ago by • 0 • written 5.4 years ago by • 0
0
votes
0
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639
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A problem about changeCtLayout in HTqPCR
htqpcr
5.4 years ago tropicalis • 0
0
votes
3
replies
979
views
Creation of qPCRset in R for HtqPCR
R bioconductor htqpcr qpcrset object
5.6 years ago mohammedtoufiq91 ▴ 10
0
votes
0
replies
738
views
Creating qPCRset object from Bio-Rad CFX file
htqpcr limma
5.6 years ago dbars • 0
0
votes
0
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868
views
HTqPCR - unable to create a 'qPCRset' object
htqpcr expressionset
5.8 years ago jirkanov • 0
0
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0
replies
792
views
Inter-run calibration in HTqPCR R package
htqpcr R
6.0 years ago dbarscortina • 0
0
votes
0
replies
921
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Import problem with HTqPCR Fluidigm 96.96
htqpcr bioconductor fluidigm biomark
6.2 years ago reed27 • 0
0
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0
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825
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HTqPCR for Fluidigm Results
htqpcr fluidigm
6.2 years ago rhonce • 0
0
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0
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822
views
HTqPCR trouble with changeCtLayout
htqpcr qPCR
6.3 years ago samantha_jeschonek • 0
2
votes
2
replies
1.0k
views
Reading in delta Ct values using HTqPCR
htqpcr
updated 6.3 years ago by 50k • written 6.3 years ago by ▴ 10
0
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0
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727
views
Bugs in HTqPCR 1.30.0?
htqpcr
6.5 years ago h.roest • 0
1
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2
replies
1.3k
views
No differential expression with limmaCtData possible
limma htqpcr
6.5 years ago h.roest • 0
0
votes
0
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753
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HTqPCR package: problems with the limmaCtData function
htqpcr
6.9 years ago Frederico Moraes Ferreira ▴ 100
0
votes
1
reply
1.0k
views
Problem duplicated samples for ChangeCtLayout in HTqPCR with fluidigm 96*96
htqpcr
7.1 years ago carine.genet • 0
0
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0
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853
views
re-format data for HtqPCR
HtqPCR reshape
7.2 years ago Stefany Solano • 0
0
votes
0
replies
884
views
Batch Correction in HTqPCR?
qPCR htqpcr
7.3 years ago bradley • 0
0
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3
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1.3k
views
HTqPCR does not copy featureData when subsetting a qPCRset
htqpcr
updated 7.3 years ago by • 0 • written 7.3 years ago by ▴ 40
0
votes
1
reply
1.1k
views
HTqPCR cannot read more recent SDS files
htqpcr
updated 7.3 years ago by • 0 • written 7.3 years ago by ▴ 40
3
votes
7
replies
2.1k
views
Subsetting qPCRset loses sample names, possibly due to change of assayDataElementReplace
HTqPCR
7.3 years ago henrik.seidel ▴ 40
0
votes
1
reply
1.3k
views
HTqPCR: bug in subsetting qPCRset
HTqPCR htqpcr subsetting
updated 7.3 years ago by ▴ 40 • written 7.5 years ago by ★ 4.0k
3
votes
1
reply
1.4k
views
Errors with HTqPCR v1.28.0 and BioC 3.4
HTqPCR
updated 7.3 years ago by ▴ 40 • written 7.5 years ago by ▴ 20
0
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0
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819
views
HTqPCR - Multiple plates for multiple samples
htqpcr
7.6 years ago Angela LR • 0
0
votes
0
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943
views
HTqPCR limma decide test issue?
limma decide test HTqPCR
7.6 years ago polemiraza ▴ 70
0
votes
0
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750
views
setCategory flag and flag.pout argument problems
htqpcr
7.6 years ago h.roest • 0
0
votes
0
replies
1.0k
views
Combining TLDA cards for normalization
normalization microrna htqpcr
7.8 years ago jamie_jabalee • 0
1
vote
0
replies
2.0k
views
HTqPCR readCtData 12 samples x 63 genes - error: row names supplied are of the wrong length
HTqPCR readCtData Heidi Dvinge
8.1 years ago • updated 8.0 years ago virginia.claudio ▴ 10
0
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0
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1.1k
views
Error in readCtData
htqpcr readctdata connection readlines
8.1 years ago lizhensor • 0
0
votes
0
replies
936
views
Help with loading Data and reading Ct values
htqpcr
8.2 years ago Pheebz • 0
1
vote
1
reply
1.3k
views
HTQPCR - create qPCR set from a matrix of CT values
HTqPCR
updated 3.3 years ago by 50k • written 8.4 years ago by ▴ 40
0
votes
1
reply
1.2k
views
featureNames converted to numbers in limmaCtData
limma htqpcr
8.8 years ago julio.c.silver • 0
1
vote
7
replies
1.7k
views
limmaCTData Error requires ndups=2 even when there are no duplicate genes (should be ndups=1)
limma ndups htqpcr software error
updated 8.8 years ago by 50k • written 8.8 years ago by • 0
0
votes
0
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1.5k
views
Problems importing (new) LightCycler data to HTqPCR
htqpcr dataimport
9.0 years ago H.H. • 0
0
votes
2
replies
1.2k
views
HTqPCR + setting flags as unreliable problem
htqpcr flags setCategory
9.4 years ago samantha.smith-4 • 0
0
votes
1
reply
1.4k
views
Possible bug in setCategory function from HTqPCR package
htqpcr HTqPCR
updated 7.6 years ago by • 0 • written 9.5 years ago by ▴ 830
0
votes
0
replies
1.0k
views
Bugs in HTqPCR implementation of data normalization
Normalization HTqPCR Normalization HTqPCR
9.9 years ago Peter Langfelder ★ 3.0k
0
votes
0
replies
2.1k
views
reading qRT-PCR data
ddCt HTqPCR ReadqPCR ddCt HTqPCR ReadqPCR
10.0 years ago Guest User ★ 13k
0
votes
5
replies
1.5k
views
Reading in mutiple files using readCtData
HTqPCR HTqPCR
updated 10.2 years ago by 65k • written 10.2 years ago by ▴ 50
2
votes
1
reply
1.3k
views
HTqPCR- gene names not maintained in limmaCtData
annotate ddCt HTqPCR annotate ddCt HTqPCR
10.2 years ago Cornwell, Adam ▴ 110
0
votes
4
replies
1.4k
views
HTqPCR normalization issues - third posting
Normalization HTqPCR Normalization HTqPCR
updated 10.5 years ago by ★ 1.1k • written 10.5 years ago by ▴ 330
50 results • Page 1 of 1
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Comment: Numerical differences in DESeq2 output depending on different design matrix cons by JKim • 0
The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.
Comment: Ensembl plants at annotationHub? by Daniele • 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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