Bioconductor Mfuzz

Showing : Mfuzz • reset

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164

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Mfuzz

updated 12 weeks ago by James W. MacDonald 68k • written 12 weeks ago by xiao • 0

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1.9k

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Mfuzz RNASeq

20 months ago • updated 6 weeks ago boczniak767 ▴ 740

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714

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Mfuzz MacBook loadingissues

24 months ago Jon • 0

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1.5k

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Mfuzz loadingissues macbook

24 months ago Jon • 0

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1.3k

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time-series mfuzz replace=FALSE

3.4 years ago soda ▴ 80

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925

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Mfuzz

updated 4.9 years ago by James W. MacDonald 68k • written 4.9 years ago by syed.imtiazaziz • 0

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980

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mfuzz normalization

6.3 years ago xizhang • 0

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3.4k

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deseq2 rnaseq mfuzz

updated 7.3 years ago by Michael Love 43k • written 7.3 years ago by rbenel ▴ 50

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1.4k

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mfuzz fold change log2 STANDARDISATION

7.3 years ago prakashpandey1111 • 0

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942

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mfuzz

7.3 years ago prakashpandey1111 • 0

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1.7k

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deseq2 mfuzz differential expression timecourse

updated 9.0 years ago by Michael Love 43k • written 9.0 years ago by Assa Yeroslaviz ★ 1.5k

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2.6k

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cluster mfuzz gene names

updated 9.6 years ago by Assa Yeroslaviz ★ 1.5k • written 9.6 years ago by thomas.dobrenel • 0

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5.9k

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mfuzz clustering bioinformatics proteomics timecourse

updated 9.7 years ago by Laurent Gatto 1.6k • written 9.7 years ago by under-waterworld • 0

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1.4k

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Mfuzz

9.7 years ago musically.ut • 0

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1.8k

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Clustering Mfuzz Clustering Mfuzz

11.4 years ago Assa Yeroslaviz ★ 1.5k

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1.4k

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Clustering Mfuzz Clustering Mfuzz

14.6 years ago boczniak767 ▴ 740

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4.8k

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Mfuzz Mfuzz

updated 17 months ago by Caio • 0 • written 14.6 years ago by boczniak767 ▴ 740

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1.9k

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Mfuzz Mfuzz

updated 16.5 years ago by James W. MacDonald 68k • written 16.5 years ago by dorothyc ▴ 140

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1.8k

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Clustering Mfuzz Clustering Mfuzz

updated 16.6 years ago by James W. MacDonald 68k • written 16.6 years ago by dorothyc ▴ 140

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6.8k

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Clustering Mfuzz Clustering Mfuzz

updated 16.7 years ago by Steve Pederson ▴ 60 • written 16.7 years ago by gregory voisin ▴ 430

20 results • Page 1 of 1

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Answer: Issue with Soft-Thresholding in WGCNA by misty.chickadee.vckc • 0

Hi Maria, your detailed explanation is super helpful! The NA power estimate in WGCNA can be tricky. I've sometimes seen that when the data …

Comment: Interpretation of output of AffyRNAdeg and hist commands by debasainalsa • 0

When working with AffyRNAdeg output it helps to think of the table like browsing a HEYTEA Menu each row shows a feature of your slides and …

Comment: DESeq2 for candidate gene analysis by piffelpaff ▴ 20

thank you so much for answering Dr. Love!

Answer: DESeq2 for candidate gene analysis by Michael Love 43k

Your plan 1 is reasonable. Run DESeq2 on the whole dataset to obtain size factors and moderated dispersion estimates and then extract the u…

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k

Oh. ``` > z <- read10xCounts(c(tmpdir, tmpdir), mtx.class = "SVT_SparseMatrix", delayed = TRUE) > class(counts(z)) [1] "DelayedMatrix" att…

Votes

A: Multi-level experiments in Limma

Answer: Should voomWithQualityWeights still be used when the sample-specific weights var

Answer: DESeq2 for candidate gene analysis

DESeq2 for candidate gene analysis

Answer: DESeq2 for candidate gene analysis

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