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NMF
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1
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4.8k
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NMF installation with current R version
NMF
Biobase
updated 2.8 years ago by
shepherl
4.1k • written 2.9 years ago by
Abhishek
• 0
5
votes
5
replies
2.1k
views
Running NMF for single cell
NMF
scater
4.5 years ago
lirongrossmann
▴ 50
0
votes
0
replies
568
views
NMF in single cell analysis
NMF
ZeiselBrainData
4.7 years ago
sofia.puvogel
• 0
0
votes
0
replies
1.8k
views
Error in NMF estimation
MutationalPatterns
NMF
5.9 years ago
TRASA
• 0
0
votes
7
replies
3.7k
views
nmf function not working
somaticsignatures
NMF
updated 6.4 years ago by
Xin
• 0 • written 6.7 years ago by
aslam.mohammed398
• 0
0
votes
0
replies
1.0k
views
NMF pre-processsing effect on classification
NMF
log2
classification
bioconductor
6.8 years ago
Seymoo
• 0
0
votes
1
reply
1.3k
views
SomaticSignatures for Bioconductor 3.6 (R 3.4.3) depends on NMF, which is not available for R 3.4.3
NMF
somaticsignatures
R 3.4.3
updated 7.1 years ago by
shepherl
4.1k • written 7.1 years ago by
samuel.fux
• 0
0
votes
6
replies
3.6k
views
Somaticsignature NMF problem
somaticsignatures
NMF
updated 7.5 years ago by
grimmmmer
• 0 • written 8.1 years ago by
ns
• 0
0
votes
4
replies
2.8k
views
DESeq2, outlier correction, Combat, NMF
deseq2
combat
outliers
NMF
updated 7.8 years ago by
Michael Love
43k • written 7.8 years ago by
noname
• 0
0
votes
0
replies
1.3k
views
Defining metagenes from NMF in methylation array data - next step?
NMF
minfi
9.1 years ago
yura.grabovska
▴ 30
0
votes
2
replies
1.4k
views
coefmap plot - label colors
affy
coefmap
nmf
updated 9.2 years ago by
James W. MacDonald
68k • written 9.2 years ago by
thrabe
• 0
0
votes
1
reply
1.9k
views
SomaticSignatures: negative entries after ComBat adjustment
sva
somaticsignatures
batch effect
nmf
updated 9.3 years ago by
Jeff Leek
▴ 650 • written 9.3 years ago by
kw10
• 0
0
votes
1
reply
1.8k
views
NMF Package error
NMF
bioconductor
R
updated 9.7 years ago by
Martin Morgan
25k • written 9.7 years ago by
Deepak Tanwar
▴ 10
13 results • Page
1 of 1
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Comment: Error in H5Dclose(h5dataset) when trying to read in kallisto h5 files
by
Mike Smith
★ 6.6k
Tricky to try and debug this without some example files to work with. Can you provide the output of `traceback()` called immediately after…
Answer: Mismatch between Illumina Mouse Methylation BeadChip annotation and genome brows
by
James W. MacDonald
68k
The annotation data that is provided for this array is simply a repackaging of data that we get from Illumina, so any apparent inconsistenc…
Answer: Package developing and interoperation with Bioconductor
by
James W. MacDonald
68k
Ideally you would have S4 methods that dispatch on the incoming data structure, so people could call your main function using a `data.frame…
Comment: ComBat with repeated measures
by
ATpoint
★ 4.8k
It looks to me that you do not need the batch information since subject is nested with batch so correcting for subject will do a paired ana…
Comment: Surprising behavior for DEXseq dispersion estimate plot?
by
ATpoint
★ 4.8k
You realize this is a spam bot talking to you?
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Answer: Package developing and interoperation with Bioconductor
Answer: CpGs with genomic positions greater than the chromosome size in EPICv2?
Answer: Explannation for ROAST results
A: How DiffBind run PCA based on peak data?
Looking for equivalent EPIC chip v1 vs. v2 annotation variables
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