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NOISeq
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871
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Inquiring about Comparative Analysis without Replicates in NOIseq R Package
NOISeq
withoutreplicate
Noiseq
updated 18 months ago by
ATpoint
★ 4.6k • written 18 months ago by
Rutuja
• 0
1
vote
1
reply
974
views
NOIseq Probability column
RNAseq
RNASeqData
NOISeq
2.7 years ago • updated 2.6 years ago
Pratibha
▴ 10
0
votes
2
replies
1.1k
views
Differential expression on RNAseq without replicates
DESeq2
NOISeq
edgeR
updated 4.1 years ago by
ATpoint
★ 4.6k • written 4.1 years ago by
Themis
• 0
3
votes
6
replies
2.1k
views
deseq2 + filtering low counts with noiseq function
deseq2
noiseq
lowcounts
rnaseq
updated 3.0 years ago by
Michael Love
43k • written 4.4 years ago by
andreia
▴ 10
0
votes
1
reply
967
views
How to arrange multiple plots into one page in NOISeq?
noiseq
RNA-seq
quality control
updated 8 months ago by
baptiste.bidon
• 0 • written 5.4 years ago by
Arindam
▴ 80
0
votes
0
replies
827
views
NOISeq 'readData' not writing correctly
software error
NOISeq
5.6 years ago
jledmondson
• 0
0
votes
1
reply
1.1k
views
Is possible to use NOISeq with counts from RSubread?
noiseq
rsubread
tophat
bowtie
bowtie2
5.6 years ago
Marcelo Laia
▴ 450
0
votes
0
replies
1.2k
views
Noiseqbio function (NOISEQ package)
noiseq
logfoldchange
6.8 years ago
Aurora
▴ 20
0
votes
0
replies
1.2k
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
7.0 years ago
aokoro
• 0
0
votes
0
replies
1.8k
views
Problem with heatmap by ComplexHeatmap
complexheatmap
Rstudio
NOISeq
7.4 years ago
Luiz
• 0
0
votes
3
replies
1.7k
views
Is the CPM filtering method from NOISeq unsupervised?
rnaseq
de analysis
gene filtering
noiseq
updated 7.5 years ago by
James W. MacDonald
67k • written 7.5 years ago by
Mau
▴ 50
0
votes
5
replies
4.2k
views
GC content and length bias correction with DESeq2 using cqn normalization factor matrix
deseq2
cqn
noiseq
updated 7.7 years ago by
Michael Love
43k • written 7.7 years ago by
glmazzo
▴ 10
0
votes
0
replies
1.4k
views
NOISeq error message while using ARSyNseq batch correction function
noiseq
batch effect
ARSyNseq
9.3 years ago
lina.faller
▴ 10
0
votes
0
replies
1.2k
views
Question: type of NOISeq package input file
RNASeq
NOISeq
RNASeq
NOISeq
11.9 years ago
Guest User
★ 13k
0
votes
2
replies
3.0k
views
NOISeq initialization problem
NOISeq
NOISeq
updated 12.3 years ago by
Dan Tenenbaum
★ 8.2k • written 12.3 years ago by
Guest User
★ 13k
0
votes
4
replies
2.3k
views
NOISeq installation error
NOISeq
NOISeq
updated 12.3 years ago by
Sean Davis
21k • written 12.3 years ago by
Fatemehsadat Seyednasrollah
▴ 260
0
votes
0
replies
1.3k
views
NOISeq-real input parameters
NOISeq
NOISeq
12.9 years ago
Guest User
★ 13k
17 results • Page
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Recent ...
Replies
Comment: Unused arguments error without used arguments in GSVA?
by
1sunmic2
• 0
It was due to the comma. Thank you!
Answer: Unused arguments error without used arguments in GSVA?
by
Axel Klenk
★ 1.1k
Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…
Answer: Restricting differential binding analysis to only TSS-proximal regions
by
Aaron Lun
★ 28k
Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…
Comment: Sample-specific methylation values using QSEA
by
User3088
• 0
Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…
Comment: input for singR function
by
iamin053
• 0
Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!
Votes
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Unused arguments error without used arguments in GSVA?
Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte
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