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NOISeq
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1.2k
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Inquiring about Comparative Analysis without Replicates in NOIseq R Package
NOISeq
withoutreplicate
Noiseq
updated 2.1 years ago by
ATpoint
★ 4.9k • written 2.1 years ago by
Rutuja
• 0
1
vote
1
reply
1.1k
views
NOIseq Probability column
RNAseq
RNASeqData
NOISeq
3.3 years ago
Pratibha
▴ 10
0
votes
2
replies
1.2k
views
Differential expression on RNAseq without replicates
DESeq2
NOISeq
edgeR
updated 4.8 years ago by
ATpoint
★ 4.9k • written 4.8 years ago by
Themis
• 0
3
votes
6
replies
2.5k
views
deseq2 + filtering low counts with noiseq function
deseq2
noiseq
lowcounts
rnaseq
updated 3.7 years ago by
Michael Love
43k • written 5.0 years ago by
andreia
▴ 10
0
votes
1
reply
1.2k
views
How to arrange multiple plots into one page in NOISeq?
noiseq
RNA-seq
quality control
updated 16 months ago by
baptiste.bidon
• 0 • written 6.1 years ago by
Arindam
▴ 80
0
votes
0
replies
933
views
NOISeq 'readData' not writing correctly
software error
NOISeq
6.2 years ago
jledmondson
• 0
0
votes
1
reply
1.2k
views
Is possible to use NOISeq with counts from RSubread?
noiseq
rsubread
tophat
bowtie
bowtie2
6.3 years ago
Marcelo Laia
▴ 450
0
votes
0
replies
1.3k
views
Noiseqbio function (NOISEQ package)
noiseq
logfoldchange
7.4 years ago
Aurora
▴ 20
0
votes
0
replies
1.3k
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
7.7 years ago
aokoro
• 0
0
votes
0
replies
2.1k
views
Problem with heatmap by ComplexHeatmap
complexheatmap
Rstudio
NOISeq
8.0 years ago
Luiz
• 0
0
votes
3
replies
1.9k
views
Is the CPM filtering method from NOISeq unsupervised?
rnaseq
de analysis
gene filtering
noiseq
updated 8.1 years ago by
James W. MacDonald
68k • written 8.1 years ago by
Mau
▴ 50
0
votes
5
replies
4.6k
views
GC content and length bias correction with DESeq2 using cqn normalization factor matrix
deseq2
cqn
noiseq
updated 8.4 years ago by
Michael Love
43k • written 8.4 years ago by
glmazzo
▴ 10
0
votes
0
replies
1.5k
views
NOISeq error message while using ARSyNseq batch correction function
noiseq
batch effect
ARSyNseq
9.9 years ago
lina.faller
▴ 10
0
votes
0
replies
1.3k
views
Question: type of NOISeq package input file
RNASeq
NOISeq
RNASeq
NOISeq
12.6 years ago
Guest User
★ 13k
0
votes
2
replies
3.2k
views
NOISeq initialization problem
NOISeq
NOISeq
updated 13.0 years ago by
Dan Tenenbaum
★ 8.2k • written 13.0 years ago by
Guest User
★ 13k
0
votes
4
replies
2.4k
views
NOISeq installation error
NOISeq
NOISeq
updated 13.0 years ago by
Sean Davis
21k • written 13.0 years ago by
Fatemehsadat Seyednasrollah
▴ 260
0
votes
0
replies
1.4k
views
NOISeq-real input parameters
NOISeq
NOISeq
13.5 years ago
Guest User
★ 13k
17 results • Page
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Replies
Comment: Sharing a collection of datasets in ExperimentHub
by
Peter Hickey
▴ 760
The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …
Answer: EuroBioC2023 abstract submission is open!
by
efuite222
• 0
Abstract submissions are now open for the #EuroBioC2023 conference in Ghent, Belgium, from September 20-22; submit by April 14 for opportu…
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
by
ReinholdGaylord99
• 0
Thank you so much! https://www.nature.com/articles/s41467-021-25960-2/ [geometry dash lite](https://geometrydashlite.online)
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
by
Gordon Smyth
53k
I'm not sure that I understand. You have a dataset that, even after pseudo-bulking, still has 6000 samples? That is surprising. Retaining …
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
by
abaed
• 0
Hello again @gordonsmyth, I've now applied the analysis using a more detailed annotation of cell types/clusters, which includes about 100 …
Votes
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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