Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Network
•
reset
0
votes
10
replies
2.4k
views
assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Microarray
Annotation
GO
Network
Regression
Survival
Infrastructure
Escherichia coli
ROC
11.2 years ago
Julie Zhu
★ 4.3k
0
votes
7
replies
1.8k
views
Kegg pathway --> gene network
Pathways
Network
Pathways
Network
updated 15.4 years ago by
Martin Morgan
25k • written 15.4 years ago by
Gavai, Anand
▴ 40
1
vote
10
replies
2.1k
views
Interprteting the phylogenomic profiles plot
syntenet
synteny
Network
written 17 months ago by
Alexandros
• 0
0
votes
12
replies
2.3k
views
new package for generating interactive HTML reports
Network
limma
GOstats
GSEAlm
edgeR
ReportingTools
Network
limma
GOstats
GSEAlm
edgeR
updated 11.3 years ago by
Malcolm Cook
★ 1.6k • written 11.3 years ago by
Josh Kaminker
▴ 20
1
vote
7
replies
2.7k
views
Shiny app for RefNet, PSICQUIC: annotated protein/protein interactions
shiny
network
interactions
9.5 years ago
pshannon
▴ 100
0
votes
3
replies
1.4k
views
tool for drawing interaction network
Pathways
Network
Pathways
Network
updated 14.0 years ago by
Michael Imbeault
▴ 220 • written 14.0 years ago by
Guido Hooiveld
★ 3.9k
0
votes
3
replies
1.7k
views
identifying network communities in a protein-protein interaction graph
Network
Network
updated 14.3 years ago by
Stijn van Dongen
▴ 80 • written 14.3 years ago by
Coghlan, Avril
▴ 190
0
votes
2
replies
1.3k
views
limma for homemade microarray - question on NAs and multiple probes for one gene
Microarray
Normalization
GO
Network
Cancer
probe
limma
Microarray
Normalization
GO
probe
updated 10.8 years ago by
Gordon Smyth
50k • written 10.8 years ago by
Peter Langfelder
★ 3.0k
0
votes
3
replies
2.3k
views
WGCNA chooseTopHubInEachModule function
Network
Network
11.9 years ago
Sudeep Sahadevan
▴ 20
0
votes
7
replies
1.2k
views
(no subject)
Network
Network
updated 11.0 years ago by
Gordon Smyth
50k • written 11.0 years ago by
abdul rawoof
▴ 60
0
votes
2
replies
1.1k
views
Error in gammaFitEM for library(lumi) [Possible Bug]
Preprocessing
Network
Preprocessing
Network
updated 12.2 years ago by
Pan Du
▴ 440 • written 12.3 years ago by
Chang Jun Park
▴ 10
0
votes
3
replies
1.9k
views
Drawing network graphs (i.e. nodes and edges)
Network
Network
updated 18.3 years ago by
Saurin D. Jani
▴ 360 • written 18.3 years ago by
Peter
▴ 170
0
votes
2
replies
6.0k
views
WGCNA package
Network
Network
updated 10.1 years ago by
Peter Langfelder
★ 3.0k • written 10.1 years ago by
amit kumar subudhi
▴ 130
8
votes
4
replies
6.9k
views
WGCNA: overlapping colors in plotDendroAndColors?
wgcna
plotDendroAndColors
Network
updated 9.7 years ago by
Peter Langfelder
★ 3.0k • written 9.7 years ago by
Keith Hughitt
▴ 180
0
votes
2
replies
1.4k
views
proposed: a bridge between R and Cytoscape
Visualization
Network
graph
Visualization
Network
graph
updated 13.9 years ago by
Steve Lianoglou
★ 13k • written 13.9 years ago by
Paul Shannon
★ 1.1k
0
votes
2
replies
1.0k
views
Network plot
Network
Network
updated 13.9 years ago by
Sean Davis
21k • written 13.9 years ago by
Hernando Martínez
▴ 100
15
votes
17
replies
23k
views
WGCNA: What is `soft thresholding`?
wgcna
network analysis
network
correlation
coexpression
updated 3.4 years ago by
Lluís Revilla Sancho
▴ 730 • written 7.7 years ago by
jol.espinoz
▴ 40
0
votes
7
replies
1.5k
views
GeneAnswer package Query
Network
graph
Network
graph
updated 11.7 years ago by
Gilbert Feng
▴ 300 • written 11.7 years ago by
Reema Singh
▴ 570
0
votes
3
replies
1.4k
views
building enzyme centric metabolic network
Network
KEGGSOAP
Network
KEGGSOAP
updated 15.1 years ago by
Martin Morgan
25k • written 15.1 years ago by
anupam sinha
▴ 270
0
votes
4
replies
1.5k
views
Bioconductor 2.8 is released
SNP
Sequencing
miRNA
Microarray
Annotation
Normalization
Pathways
Preprocessing
Network
updated 13.1 years ago by
Ivan Gregoretti
▴ 310 • written 13.1 years ago by
Dan Tenenbaum
★ 8.2k
0
votes
2
replies
1.4k
views
AgiMicroRna package is not available at bioconductor or not in active form???
Microarray
Network
microRNA
AgiMicroRna
Microarray
Network
microRNA
AgiMicroRna
updated 14.2 years ago by
Alberto Goldoni
▴ 60 • written 14.2 years ago by
Sean Davis
21k
2
votes
6
replies
4.7k
views
Error running TOMplot in WGCNA package
wgcna
network
updated 9.6 years ago by
Keith Hughitt
▴ 180 • written 9.6 years ago by
Jon Bråte
▴ 250
0
votes
2
replies
2.7k
views
WGCNA - Using real data for tutorial III
pathways
wgcna
network
rna-seq
8.3 years ago
hywel.williams
• 0
0
votes
8
replies
1.7k
views
Visualization of metabolic network in lpSolve format
Network
Network
11.2 years ago
Denis Kazakiewicz
▴ 70
0
votes
4
replies
1.4k
views
Example of converting graphNEL object to ajacency matrix?
Network
convert
Network
convert
updated 16.1 years ago by
rgentleman
★ 5.5k • written 16.1 years ago by
Zembower, Kevin
▴ 50
1
vote
1
reply
1.4k
views
WGCNA_ Eigengene and sample complications correlations
Network
Network
updated 9.9 years ago by
Peter Langfelder
★ 3.0k • written 9.9 years ago by
amit kumar subudhi
▴ 130
0
votes
1
reply
1.8k
views
How to compare GO term lists and create matching network?
GO
Network
GUI
Organism
GO
Network
GUI
Organism
updated 10.5 years ago by
Paul Shannon
▴ 750 • written 10.5 years ago by
biotech
▴ 160
0
votes
2
replies
3.9k
views
Gene filtering for RNA-seq data
Normalization
GO
Network
HTSFilter
DESeq2
Normalization
GO
Network
HTSFilter
DESeq2
updated 10.5 years ago by
Michael Love
42k • written 10.5 years ago by
Guest User
★ 13k
0
votes
1
reply
1.1k
views
5000 nodes RCytoscape
Network
graph
Network
graph
11.2 years ago • updated 11.1 years ago
Paul Shannon
▴ 750
0
votes
1
reply
1.6k
views
WGCNA_ problem in creating scale free topology plot
Network
Network
updated 9.9 years ago by
James W. MacDonald
65k • written 9.9 years ago by
amit kumar subudhi
▴ 130
0
votes
1
reply
820
views
Connect with me on LinkedIn
Network
Network
11.5 years ago
gabriel teku
▴ 80
0
votes
1
reply
913
views
Re: Try to run a lots of chips: 32 bits vs 64 bits
Normalization
GO
Network
Normalization
GO
Network
updated 21.2 years ago by
Anthony Rossini
▴ 530 • written 21.2 years ago by
Nicholas Lewin-Koh
▴ 430
0
votes
3
replies
1.1k
views
rna-seq
Microarray
Pathways
Network
goseq
Microarray
Pathways
Network
goseq
updated 11.6 years ago by
Aliaksei Holik
▴ 350 • written 11.6 years ago by
Guest User
★ 13k
7
votes
1
reply
3.5k
views
Using RNA-Seq raw count data in Weighted Gene Co-Expression Network Analysis
rnaseq
network
limma
updated 9.6 years ago by
Steve Lianoglou
★ 13k • written 9.6 years ago by
Jon Bråte
▴ 250
0
votes
1
reply
1.2k
views
FrozenRMA how to
Microarray
Network
hgu133plus2
Biobase
PROcess
KEGGSOAP
beadarray
EBImage
edgeR
frma
updated 12.2 years ago by
Matthew McCall
▴ 830 • written 12.2 years ago by
Alex Sanchez
▴ 20
0
votes
2
replies
1.4k
views
bug in rendering reciprocal edges?
Network
graph
Rgraphviz
Network
graph
Rgraphviz
updated 12.7 years ago by
Nishant Gopalakrishnan
▴ 340 • written 12.7 years ago by
Wouter van Atteveldt
▴ 20
0
votes
5
replies
3.5k
views
Adjacency to network using R
Visualization
Network
convert
Visualization
Network
convert
updated 12.1 years ago by
Tim Triche
★ 4.2k • written 12.1 years ago by
pankaj borah
▴ 120
0
votes
1
reply
1.5k
views
Which resources for pathway analysis?
Pathways
Network
SPIA
DEGraph
Pathways
Network
SPIA
DEGraph
updated 13.2 years ago by
January Weiner
▴ 370 • written 13.2 years ago by
laurent jacob
▴ 100
0
votes
1
reply
1.5k
views
IdeogramTrack and bigWig file errors in Gviz
ChIPSeq
GO
Network
rtracklayer
CAMERA
chipseq
Gviz
ChIPSeq
GO
Network
rtracklayer
Gviz
updated 10.6 years ago by
Michael Lawrence
★ 11k • written 10.6 years ago by
Miles Pufall
▴ 40
0
votes
4
replies
1.4k
views
[R] RCytoscape setPosition error
Network
Cancer
graph
Network
Cancer
graph
updated 13.2 years ago by
Fahim Md
▴ 250 • written 13.2 years ago by
Paul Shannon
★ 1.1k
0
votes
2
replies
1.5k
views
RV: wgcna
Network
Cancer
Network
Cancer
updated 12.9 years ago by
Robert Castelo
★ 3.3k • written 12.9 years ago by
Raquel Martinez Garcia
▴ 50
0
votes
1
reply
882
views
network analyses on genes or probesets
Microarray
Annotation
Normalization
Preprocessing
Network
Microarray
Annotation
Network
updated 15.2 years ago by
Marc Carlson
★ 7.2k • written 15.2 years ago by
Markus Schmidberger
▴ 380
0
votes
2
replies
1.2k
views
Affymetrix MASv5 code & sample data
Network
Network
updated 18.9 years ago by
Adaikalavan Ramasamy
★ 1.8k • written 18.9 years ago by
Lelivelt, Mike
▴ 50
0
votes
2
replies
919
views
KEGG analysis
Network
Cancer
Network
Cancer
15.1 years ago
Daniel Brewer
★ 1.9k
0
votes
1
reply
755
views
BioPAX/SBPAX import for MicroArray Analysis and Hypothesis Building
Microarray
Pathways
Network
Microarray
Pathways
Network
updated 12.0 years ago by
Tim Triche
★ 4.2k • written 12.0 years ago by
Oliver Ruebenacker
▴ 110
0
votes
6
replies
1.5k
views
Network install of packages
Network
Network
updated 15.5 years ago by
Sean Davis
21k • written 15.5 years ago by
Anthony Mullen
▴ 20
0
votes
1
reply
1.4k
views
FW: Overlay Gene Expression on SNP (copy number) data
SNP
Coverage
Network
Cancer
TranscriptDb
IRanges
RCytoscape
ggbio
Gviz
SNP
Coverage
updated 12.1 years ago by
Tim Triche
★ 4.2k • written 12.1 years ago by
Ekta Jain
▴ 370
0
votes
1
reply
1.1k
views
Unable to
Network
Network
updated 11.2 years ago by
Dan Tenenbaum
★ 8.2k • written 11.2 years ago by
Guest User
★ 13k
0
votes
1
reply
867
views
Aniket Mishra wants to stay in touch on LinkedIn
Network
Network
13.6 years ago
Aniket Vatsya
▴ 40
0
votes
6
replies
1.5k
views
Regarding KEGGgraph
Pathways
Network
PROcess
Pathways
Network
PROcess
updated 14.3 years ago by
Wolfgang Huber
★ 13k • written 14.3 years ago by
anupam sinha
▴ 270
50 results • Page
1 of 1
Recent ...
Replies
Answer: SingleR Label.Ont
by
Denis
• 0
[Jackpot City Casino][1] is the perfect option when looking for an online casino in Canada for an exciting vacation and huge winnings that …
Comment: deseq2 results
by
sajadahmad41454
• 0
thank you so much and sorry for bothering you again and again, it is urgent because it is my project deadline. i have removed that sample a…
Comment: deseq2 results
by
swbarnes2
★ 1.4k
Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …
Comment: Can't post a question containing code?
by
NATASHA
• 0
did you find a solution? I´m having the same problem
Comment: error
by
NATASHA
• 0
Please ignore, i didnt copy all the scrip
Votes
A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
Awards
• All
Popular Question
to
maria.soler
• 0
Popular Question
to
Pietro
▴ 40
Popular Question
to
neilzhao
▴ 30
Popular Question
to
ATpoint
★ 4.1k
Teacher
to
Michael Love
42k
Locations
• All
France,
9 minutes ago
India,
15 minutes ago
Sweden,
43 minutes ago
United States,
55 minutes ago
WEHI, Melbourne, Australia,
2 hours ago
Traffic: 396 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6