Bioconductor PCATools

Showing : PCATools • reset

votes

replies

247

views

COTAN PCAtools

10 months ago Silvia • 0

vote

replies

1.1k

views

DESeq2 eigencorplot PCAtools

18 months ago BioinfGuru ▴ 70

votes

replies

743

views

DESeq2 PCAtools

updated 19 months ago by Michael Love 43k • written 19 months ago by Aaliya • 0

votes

replies

2.7k

views

DESeq2 RSTUDIO PCAtools

updated 19 months ago by swbarnes2 ★ 1.4k • written 19 months ago by Aaliya • 0

votes

replies

2.3k

views

edgeR PCAtools

written 20 months ago by Fabian • 0

votes

replies

6.2k

views

ellipse RNAseq PCAtools

updated 2.6 years ago by CP • 0 • written 4.5 years ago by elizabethe819 • 0

vote

replies

2.0k

views

Biplot FactoMineR proteomics PCAtools ellipse

updated 2.9 years ago by Kevin Blighe ★ 4.0k • written 2.9 years ago by M Tuhin • 0

vote

2.0k

views

illumina PCAtools PCA

updated 3.0 years ago by Kevin Blighe ★ 4.0k • written 3.0 years ago by ilaria.debenedictis • 0

votes

1.3k

views

PCAtools bioconductor

updated 3.3 years ago by James W. MacDonald 68k • written 3.3 years ago by pterry • 0

votes

replies

2.4k

views

PCAtools pcaExplorer pcaMethods

updated 3.4 years ago by Federico Marini ▴ 180 • written 3.4 years ago by m610110001 • 0

votes

replies

4.3k

views

PCAtools edgeR pcaExplorer RNASeq RNAseq123

3.6 years ago Alan • 0

votes

replies

1.4k

views

PCAtools

4.7 years ago luca.s ▴ 50

votes

replies

4.0k

views

PCAtools

updated 4.8 years ago by Kevin Blighe ★ 4.0k • written 4.8 years ago by Terra • 0

votes

replies

4.5k

views

biplot PCA RNASeq PCAtools

updated 4.9 years ago by Kevin Blighe ★ 4.0k • written 4.9 years ago by mschmidt ▴ 10

votes

2.5k

views

PCAtools biplot DESeq2 RNASeq PCA

updated 5.0 years ago by Kevin Blighe ★ 4.0k • written 5.0 years ago by ecg1g15 ▴ 30

vote

replies

2.1k

views

PCATools

updated 5.1 years ago by Kevin Blighe ★ 4.0k • written 5.1 years ago by oakhamwolf • 0

votes

replies

2.5k

views

EDA pcaExplorer PCAtools PCA

updated 3.9 years ago by Miguel ▴ 20 • written 5.3 years ago by k.vitting.seerup ▴ 120

17 results • Page 1 of 1

Recent ...

Replies

Comment: upstream git branches of bioc-release by TrentonCollier99 • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.

Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k

I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```

Votes

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

Awards • All