Bioconductor RUV

Showing : RUV • reset

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484

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SpikeIn RUVSeq DESeq2 RUV

updated 5 months ago by Michael Love 43k • written 5 months ago by Ειρήνη • 0

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1.7k

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RUV4 RUV Microarray

3.6 years ago Antonio • 0

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1.9k

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RUVSeq RUV RNA-seq

updated 4.2 years ago by James W. MacDonald 67k • written 4.2 years ago by karissa.barthelson ▴ 20

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1.9k

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RUV Nanostring RUV-III

updated 4.7 years ago by hermidalc ▴ 20 • written 5.4 years ago by raf4 ▴ 30

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1.2k

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deseq2 RUV batch highly variable genes

updated 4.8 years ago by tmms • 0 • written 4.8 years ago by f_pardow • 0

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1.4k

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deseq2 ruv batch

updated 5.2 years ago by Michael Love 43k • written 5.2 years ago by r.tom • 0

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1.1k

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missmethyl epic illuminahumanmethylationepicanno.ilm10b4.hg19. ruv

6.3 years ago peter.fransquet • 0

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1.1k

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methylation missmethyl RUV batch effect

6.6 years ago RC • 0

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1.1k

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missmethyl RUV control probes

6.6 years ago Taub, Margaret ▴ 10

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2.9k

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ruv ruvseq ruvnormalize single-cell zero-inflated

updated 7.4 years ago by davide risso ▴ 980 • written 7.4 years ago by Nik Tuzov ▴ 90

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2.7k

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RUV ruvseq ruvr ruvnormalize single cell

7.4 years ago Nik Tuzov ▴ 90

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1.0k

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rnaseq ruv differential gene expression R

7.5 years ago manish20072013 • 0

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3.5k

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RUV single cell batch effect

7.7 years ago ribioinfo ▴ 100

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1.2k

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ruv

7.8 years ago sasha • 0

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2.6k

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ruvseq ruvg ruv

updated 7.9 years ago by davide risso ▴ 980 • written 8.0 years ago by weiwsmiling • 0

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1.2k

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methylation gene expression sva batch effect ruv

8.0 years ago carleshf ▴ 10

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1.8k

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ruvseq RUV ruvnormalize ruvg

8.4 years ago anthonycolombo60 • 0

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2.6k

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ruvseq ruv microrna

9.4 years ago sergio.espeso-gil • 0

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1.8k

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ruv microarray

updated 9.4 years ago by gthm ▴ 30 • written 9.6 years ago by Pauly Lin ▴ 160

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2.9k

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ruvseq ruv

updated 9.6 years ago by davide risso ▴ 980 • written 9.6 years ago by Pauly Lin ▴ 160

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3.0k

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RUV ruvseq rnaseq

9.6 years ago sergio.espeso-gil • 0

21 results • Page 1 of 1

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Comment: Feature Counts - potential bug with outfile.jcounts by chris2.a.white • 0

Hi @gordonsmyth and @weishi, Firstly, thank you for offering your time to develop the junction quantification module further. This is gre…

Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by xiaofeiwang198266 • 0

Hi Tim, Thanks for your reply! Yes, my data is 450K, and it is TCGA methylation data downloaded by TCGAbiolinks. The problem is that I can …

Answer: Error in get_anno_data(ontology) : ontology not supported yet... by Guido Hooiveld ★ 4.1k

Did you check the help page for the function `enrichDO`? Type `?enrichDO`. I am asking, because there it is stated that the argument `ont`…

Comment: Build error on kunpeng2 Linux aarch64 by martin.grigorov ▴ 10

Hi, There was a problem with `icu` and because of that the (r)curl library was not installed. The system/OS curl library is one version ol…

Answer: Standardization of rlog transformed counts before PCA by ATpoint ★ 4.6k

I guess you mean scaling in terms of Z-scoring? There are plenty of posts towards scaling in PCA both here on Bioconductor and in other com…

Votes

Comment: Feature Counts - potential bug with outfile.jcounts

Answer: Feature Counts - potential bug with outfile.jcounts

Comment: Can we get beta values with DMRcate package

Answer: Can we get beta values with DMRcate package

DiffBind giving different results from dba.report() and dba.analyze(..., bRetrieveAnalysis=TRUE)

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Popular Question to martin.grigorov ▴ 10

Scholar to James W. MacDonald 67k