Showing : RUVnormalize • reset
1
vote
0
replies
563
views
RUVg spike-in assumption global expression
RUVSeq RUVnormalize
16 months ago Erdi ▴ 10
0
votes
0
replies
521
views
determine k during RUVSeq
RUVSeq RUVnormalize
17 months ago Ειρήνη • 0
1
vote
2
replies
1.5k
views
Removing Unwanted Variations
DESeq2 NanoStringNCTools RUVnormalize RUVSeq DifferentialExpression
2.6 years ago AZ ▴ 30
0
votes
4
replies
3.6k
views
Confused about using RUVg in getting negative control genes using RUVg
RUVnormalize R edgeR RUVSeq RUVnormalizeData
3.4 years ago Mohamed ▴ 30
0
votes
1
reply
867
views
Is RUVnormalize applicable to small dataset?
RUVnormalize protein mi
7.0 years ago losik • 0
0
votes
2
replies
1.4k
views
RUVnormalize- How to output a corrected expression matrix without negative values to use for DEG analysis(i.e. limma) ?
RUVnormalize limma corrected expression matrix microarray
updated 7.8 years ago by ★ 1.6k • written 7.8 years ago by • 0
2
votes
9
replies
3.5k
views
Zero inflation in RUV normalization and DE for single cell data
ruv ruvseq ruvnormalize single-cell zero-inflated
updated 8.2 years ago by ▴ 980 • written 8.3 years ago by ▴ 90
1
vote
3
replies
3.2k
views
Does it make sense to consider RUVr normalization for single cell RNA analysis?
RUV ruvseq ruvr ruvnormalize single cell
8.3 years ago Nik Tuzov ▴ 90
2
votes
1
reply
1.7k
views
Decide normalisation method in RUVseq for RNAseq data
edger ruvseq rnaseq normalization ruvnormalize
updated 8.4 years ago by ▴ 980 • written 8.4 years ago by • 0
2
votes
1
reply
2.1k
views
RUVSeq empirical negative controls? how many to take to find the span set
ruvseq RUV ruvnormalize ruvg
9.3 years ago anthonycolombo60 • 0
2
votes
6
replies
2.1k
views
effect of polyploidy level on RUVs normalisation
normalization ruvseq ruvnormalize ruvs eda
9.5 years ago thomas.wolfe • 0
0
votes
0
replies
1.7k
views
Technical Replicates and RUVs Normalisation
rnaseq ruvnormalize normalization technical replicates
9.9 years ago thomas.wolfe • 0
1
vote
1
reply
1.6k
views
RUVnormalize- should input be pre-normalized?
ruvnormalize microarray normalization
updated 10.4 years ago by ▴ 10 • written 10.4 years ago by ▴ 110
2
votes
1
reply
1.6k
views
naiveRandRUV Error When k is 1
RUVNormalize Subsetting
updated 10.4 years ago by ▴ 10 • written 10.5 years ago by ★ 1.6k
14 results • Page 1 of 1
Recent ...
Replies
Comment: Suppress warning in RHDF5 write by nicolas.lhuillier • 0
Thanks a lot for the quick and effective reply. I had tried "suppressWarnings" but not "suppressMessages".
Answer: Suppress warning in RHDF5 write by James W. MacDonald 68k
``` > fun <- function() message("this is a message") > fun() this is a message > suppressMessages(fun()) > ```
Answer: Failure to download resources (MeSHDb) from AnnotationHub by shepherl 4.2k
apologies. These are contributed by someone outside the core team. On upload I did not realize they included the older Bioconductor storage…
Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k
This should now be resolved
Answer: Question about collapsing ASVs by genus level during DESeq2 analysis by Michael Love 43k
I'll just note that microbiome stats folks tend to use other tools than DESeq2. > several ASVs belong to the same genus but are not iden…
Votes
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Awards • All
Scholar to James W. MacDonald 68k
Popular Question to Daniel Cameron ▴ 40
Popular Question to Peter Hickey ▴ 760
Popular Question to edward.esiribloom • 0
Popular Question to Fred Hutch (Recruiting) ▴ 40
Locations • All
The city by the bay, 46 minutes ago
United States, 59 minutes ago
United States, 1 hour ago
United States, 1 hour ago
San Diego, 1 hour ago
Traffic: 745 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6