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News: News: Bioinformatics Summer School - July 2020 - UCLouvain (Belgium)
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5.9 years ago Laurent Gatto 1.6k
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News: LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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8.0 years ago mnchoi67 ▴ 40
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News: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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8.0 years ago mnchoi67 ▴ 40
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BioC happening in 2018?
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8.4 years ago s.munster ▴ 40
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News: Advanced R programming course - EMBL Heidelberg, 3-4 April 2017
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9.0 years ago • updated 8.8 years ago Laurent Gatto 1.6k
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News: Workshop: microRNA Analysis Using Next-Generation Sequencing - From microRNA profiling and prediction to extensive downstream analyses
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9.6 years ago adele.feuerstein • 0
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News: Course: Analysis of RNA-seq and ChIP-seq data, March 29th - April 1st, Oeiras, Portugal
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9.9 years ago Mark Dunning ★ 1.1k
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News: Course: Statistics and Computing in Genome Data Science, July 10-15, 2016
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9.9 years ago Martin Morgan 25k
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News: Looking to attend to a Bioconductor course for biologists in Europe
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updated 10.7 years ago by ▴ 370 • written 10.7 years ago by ▴ 20
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News: 4 days left to register for a short course on computational proteomics
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10.9 years ago Olga Vitek ▴ 40
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News: Course Announcement: Use R / Bioconductor for Sequence Analysis (Intermediate Course)
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10.9 years ago Martin Morgan 25k
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News: An introductory course to RNA-seq 17-19 March 2015
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10.9 years ago rcaloger ▴ 500
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News: Course announcement: CSAMA 2015 (13th ed.) Statistics and Computing in Genome Data Science
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10.9 years ago Wolfgang Huber ★ 13k
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News: Advanced Course: R programming and development 15-16. January 2015 (Thursday-Friday), EMBL Heidelberg
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11.3 years ago • updated 11.2 years ago Wolfgang Huber ★ 13k
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Comment: Question about the filterByExpr function inputs in edgeR by mohammedtoufiq91 ▴ 10
@gordonsmyth Noted, thank you very much.
Comment: Question about the filterByExpr function inputs in edgeR by Gordon Smyth 53k
Regarding edgeR v4 filtering, I didn't mention anything about a minimum count of 10 but rather said "a positive count". So a minimalistic f…
Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by JKim • 0
Hi Emily, He left some comments regarding normalization. Here is the relevant quote: > The EList object produced by dpcQuant(), containi…
Comment: Joining different datasets and analyzing using the group-specific condition effe by James W. MacDonald 68k
Yes, making a group factor simplifies things, and you will need a new column for disease subject to avoid having a design that is not full …
Comment: Question about the filterByExpr function inputs in edgeR by mohammedtoufiq91 ▴ 10
@gordonsmyth Yes, Gender is more a nuisance factor in our experiment, and our primary interest is to compare groups. I will just use filter…
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Comment: Question about the filterByExpr function inputs in edgeR
Answer: Question about the filterByExpr function inputs in edgeR
Answer: Question about the filterByExpr function inputs in edgeR
A: DESeq2: What is the unit of DESeq2 normalized read count (VST)? Is it tag per mi
Answer: Clarification on counting in Rsubread (featureCounts)
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