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data integration
•
reset
2
votes
4
replies
959
views
Joint pathway Analysis using both gene and metabolite data sets
data integration
gene
metabolite
4.1 years ago
emisecherre
• 0
0
votes
2
replies
1.6k
views
Possible Data integration of molecular data(transcriptomic) and imaging data from the same patients in R
data integration
microarray
bioconductor
affymetrix
biomarkers
updated 9.1 years ago by
Wolfgang Huber
★ 13k • written 9.1 years ago by
svlachavas
▴ 830
0
votes
28
replies
3.1k
views
Job:
Postdoc on integrating and analyzing new transcriptome types in the Bgee database
rnaseq
data integration
single-cell
pacbio
across species
Job
6.1 years ago
bgee
• 0
1
vote
0
replies
2.2k
views
Job:
Postdoctoral/Senior Scientist Position in New York City- Mount Sinai School of Medicine
genomics
data integration
job
ngs
computational biology
Job
8.9 years ago
supindab
▴ 10
0
votes
0
replies
1.2k
views
Possible(validated) methodology implemented in R for integrating and analyzing clinical data with gene expression data in R
data integration
clinicaldata
gene expression data
PET
8.6 years ago
svlachavas
▴ 830
0
votes
0
replies
1.7k
views
Job:
Research Scientist in Bioinformatics/Statistical Genomics, Max Planck Institute, Nijmegen, Netherlands
job
rnaseq
rna-seq
genomics
data integration
Job
8.6 years ago
clyde.francks
• 0
0
votes
0
replies
1.8k
views
Job:
Data scientist/bioinformatician - Paris
Genomics
metabolomics
biostatistics
data integration
Job
8.5 years ago
David Enot
▴ 30
0
votes
0
replies
1.2k
views
Job:
PhD Position in Bioinformatics
bioinformatics
protein
variantannotation
data integration
Job
7.5 years ago
stephan.pabinger
• 0
0
votes
0
replies
1.4k
views
News:
Pathview Web server published in NAR
pathway analysis
visualization
data integration
omics
pathview
News
7.0 years ago
Luo Weijun
★ 1.6k
1
vote
0
replies
1.9k
views
Job:
PhD position - Heidelberg: Bioinformatic analysis of high-throughput and image-based RNAi screening data
high-throughput screening
RNAi
image analysis
data integration
visualization
Job
9.1 years ago
e.schmidt
▴ 10
2
votes
0
replies
990
views
Job:
Research Fellow, Computational Cancer Genomics (University College London)
cancer
genomics
machine learning
data integration
multi-omics
Job
5.2 years ago
msecrier
▴ 20
0
votes
0
replies
924
views
Job:
Bionformatician Position / Heidelberg
neuroscience
data integration
transcriptomics
Job
5.1 years ago • updated 5.0 years ago
slezak
• 0
0
votes
0
replies
1.0k
views
Job:
Research Fellow, Computational Multi-Omics of Cancer (University College London)
cancer
multi-omics
genomic instability
machine learning
data integration
Job
5.1 years ago
msecrier
▴ 20
1
vote
0
replies
777
views
Job:
Metabolomics Bioinformatics Postdoc Position at Steno Diabetes Center Copenhagen
metabolomics
lipidomics
clinical research
data integration
biostatistics
Job
4.2 years ago
Tommi Suvitaival
▴ 10
0
votes
0
replies
1.6k
views
Machine learning methods for feature selection and possible correlation with clinical data
machinelearning
clinicaldata
biomarkers
data integration
bioconductor
9.0 years ago
svlachavas
▴ 830
15 results • Page
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Answer: Dominance Index for Shotgun Metagenomics Data
by
Leo Lahti
▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
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Leo Lahti
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James W. MacDonald
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shepherl
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Michael Love
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