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News:
Bioconductor 3.22 Release Schedule
Devel
Release
Bioconductor
written 3 months ago by
shepherl
4.2k
0
votes
2
replies
343
views
can't post
devel
updated 5 months ago by
shepherl
4.2k • written 5 months ago by
machne
• 0
2
votes
0
replies
875
views
News:
Bioconductor 3.21 is Released!
devel
release
Release
Devel
8 months ago
shepherl
4.2k
0
votes
1
reply
870
views
News:
List of Deprecated Packages for Bioc3.20
Release
Devel
Bioconductor
14 months ago • updated 8 months ago
shepherl
4.2k
0
votes
0
replies
447
views
News:
List of Deprecated Packages for Bioc3.21
devel
Release
release
Devel
8 months ago
shepherl
4.2k
0
votes
11
replies
2.6k
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
21 months ago • updated 14 months ago
shepherl
4.2k
0
votes
1
reply
1.6k
views
Job:
Research software engineer at UPF Barcelona
JobPosting
Devel
GSVA
Software
written 3.1 years ago by
Robert Castelo
★ 3.4k
3
votes
18
replies
4.8k
views
News:
List of Deprecated Packages for Bioc3.18
Deprecation
devel
Bioconductor
Devel
2.5 years ago • updated 20 months ago
shepherl
4.2k
0
votes
4
replies
2.1k
views
News:
Important Bioconductor Release 3.18 deadlines this week
Release
Devel
release
devel
updated 2.2 years ago by
Guido Hooiveld
★ 4.1k • written 2.2 years ago by
shepherl
4.2k
0
votes
3
replies
1.2k
views
Suggested package missing from Development version of Bioconductor
Devel
updated 2.2 years ago by
shepherl
4.2k • written 2.2 years ago by
Richard
• 0
0
votes
2
replies
1.6k
views
News:
List of Deprecated Packages for Bioc3.17
Bioconductor
Deprecation
Devel
devel
2.7 years ago • updated 2.5 years ago
shepherl
4.2k
0
votes
2
replies
1.0k
views
No compilation on Windows y compilation on linux
Devel
PackageType
deve
2.6 years ago • updated 2.5 years ago
Franck RICHARD
• 0
3
votes
6
replies
1.9k
views
News:
Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software
Bioconductor
Devel
devel
updated 2.7 years ago by
darrelvanhoy
• 0 • written 2.8 years ago by
shepherl
4.2k
1
vote
2
replies
1.9k
views
GO.db for Bioconductor 3.17
GO.db
devel
2.8 years ago
Amanda D. Clark
• 0
0
votes
0
replies
951
views
News:
Last day to make commits before Release 3.16
Release
Devel
Bioconductor
release
devel
3.1 years ago
shepherl
4.2k
0
votes
2
replies
1.3k
views
News:
List of Deprecated Packages for Bioc3.16
Release
Deprecation
Devel
Bioconductor
3.2 years ago • updated 3.1 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release
Devel
Bioconductor
Software
3.2 years ago
shepherl
4.2k
4
votes
0
replies
1.3k
views
News:
Bioconductor Release 3.16 Schedule
Release
Devel
packages
release
devel
3.3 years ago
shepherl
4.2k
0
votes
3
replies
1.4k
views
Package Review/Release Timeline
Devel
updated 3.5 years ago by
Gordon Smyth
53k • written 3.5 years ago by
Jonathan
• 0
0
votes
4
replies
1.8k
views
News:
List of Deprecated Packages for Bioc3.15
Devel
Deprecation
Release
Bioconductor
3.7 years ago • updated 3.2 years ago
shepherl
4.2k
0
votes
0
replies
1.0k
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release
Software
Bioconductor
Devel
3.7 years ago
shepherl
4.2k
1
vote
0
replies
1.4k
views
News:
Bioconductor Release 3.15 Schedule
Devel
release
packages
Release
devel
3.8 years ago
shepherl
4.2k
4
votes
2
replies
1.7k
views
GenomicRanges::union fails on R devel
devel
GenomicRanges
4.2 years ago
Guillaume Devailly
▴ 60
0
votes
2
replies
2.2k
views
unable to load shared object Rsamtools.dll':
Devel
updated 4.2 years ago by
Mike Smith
★ 6.6k • written 4.2 years ago by
Franck
• 0
1
vote
0
replies
1.4k
views
News:
Bioconductor Release 3.14 Schedule
devel
Devel
release
packages
Release
4.3 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
knitr ERROR on Biocondcutor builders
Devel
Bioconductor
Packages
BuildReport
devel
4.4 years ago
shepherl
4.2k
2
votes
9
replies
2.4k
views
New annotation package - no response from packages@bioconductor.org
Devel
devel
updated 4.5 years ago by
kayla.interdonato
▴ 160 • written 4.5 years ago by
athief
▴ 20
0
votes
0
replies
1.1k
views
News:
Last day to make commit before the RELEASE_3_13
Release
Devel
devel
release
Bioc3.13
4.6 years ago
shepherl
4.2k
0
votes
0
replies
1.3k
views
News:
Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!
Bioconductor
release
devel
deadline
4.7 years ago • updated 4.6 years ago
shepherl
4.2k
0
votes
0
replies
1.3k
views
News:
Import Deadlines for RELEASE 3.11
release
devel
deadline
bioconductor
News
5.7 years ago
shepherl
4.2k
0
votes
0
replies
1.1k
views
News:
Deadline for devel branch 3.11 to pass R CMD build and R CMD check
release
devel
bioconductor
News
5.7 years ago
shepherl
4.2k
0
votes
0
replies
1.3k
views
News:
Important Deadlines for RELEASE
release
devel
deadline
News
updated 6.2 years ago by
Martin Morgan
25k • written 6.2 years ago by
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
Deadline for commits to current Release 3.9 Branch and Devel 3.10
release
freeze
deadline
devel
News
6.2 years ago
shepherl
4.2k
0
votes
1
reply
1.4k
views
News:
Deadline for devel branch 3.9 to pass R CMD build and R CMD check
release
devel
deadline
freeze
News
6.7 years ago
shepherl
4.2k
0
votes
1
reply
1.7k
views
News:
List of Deprecated Package Bioc 3.9
deprecate
release
devel
software
experimentdata
News
6.8 years ago
shepherl
4.2k
0
votes
1
reply
1.5k
views
News:
List of Deprecated Package Bioc 3.9
deprecate
release
software
devel
News
7.0 years ago
shepherl
4.2k
1
vote
0
replies
1.4k
views
News:
Deadline for devel branch 3.8 to pass R CMD build and R CMD check
deadline
release
devel
freeze
News
7.2 years ago
shepherl
4.2k
0
votes
0
replies
1.8k
views
News:
Dockers have been updated for Bioc3.6 and Bioc3.7
docker
bioconductor
release
devel
News
8.1 years ago
shepherl
4.2k
0
votes
1
reply
2.4k
views
Is there a way to change the name of R package that is already published on bioconductor?
r
developers
devel
updated 10.1 years ago by
Martin Morgan
25k • written 10.1 years ago by
MarcinKosiński
• 0
3
votes
1
reply
1.6k
views
Reverse the effect of useDevel()
bioconductor
devel
developers
updated 10.5 years ago by
Martin Morgan
25k • written 10.5 years ago by
andrew.j.skelton73
▴ 370
40 results • Page
1 of 1
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Replies
Answer: NUPOP usage
by
shepherl
4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker?
by
fnfgame
• 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment
by
Michael Love
43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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