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News:
Bioconductor 3.22 Release Schedule
Devel
Release
Bioconductor
6 weeks ago • updated 29 days ago
shepherl
4.2k
0
votes
2
replies
299
views
can't post
devel
updated 3 months ago by
shepherl
4.2k • written 3 months ago by
machne
• 0
2
votes
0
replies
796
views
News:
Bioconductor 3.21 is Released!
devel
release
Release
Devel
6 months ago
shepherl
4.2k
0
votes
1
reply
733
views
News:
List of Deprecated Packages for Bioc3.20
Release
Devel
Bioconductor
12 months ago • updated 7 months ago
shepherl
4.2k
0
votes
0
replies
360
views
News:
List of Deprecated Packages for Bioc3.21
devel
Release
release
Devel
7 months ago
shepherl
4.2k
0
votes
11
replies
2.5k
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
20 months ago • updated 12 months ago
shepherl
4.2k
0
votes
1
reply
1.6k
views
Job:
Research software engineer at UPF Barcelona
JobPosting
Devel
GSVA
Software
written 2.9 years ago by
Robert Castelo
★ 3.4k
3
votes
18
replies
4.7k
views
News:
List of Deprecated Packages for Bioc3.18
Deprecation
devel
Bioconductor
Devel
2.3 years ago • updated 18 months ago
shepherl
4.2k
0
votes
4
replies
2.0k
views
News:
Important Bioconductor Release 3.18 deadlines this week
Release
Devel
release
devel
updated 2.0 years ago by
Guido Hooiveld
★ 4.1k • written 2.0 years ago by
shepherl
4.2k
0
votes
3
replies
1.2k
views
Suggested package missing from Development version of Bioconductor
Devel
updated 2.1 years ago by
shepherl
4.2k • written 2.1 years ago by
Richard
• 0
0
votes
2
replies
1.5k
views
News:
List of Deprecated Packages for Bioc3.17
Bioconductor
Deprecation
Devel
devel
2.6 years ago • updated 2.4 years ago
shepherl
4.2k
0
votes
2
replies
967
views
No compilation on Windows y compilation on linux
Devel
PackageType
deve
2.5 years ago • updated 2.4 years ago
Franck RICHARD
• 0
3
votes
6
replies
1.8k
views
News:
Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software
Bioconductor
Devel
devel
updated 2.6 years ago by
darrelvanhoy
• 0 • written 2.7 years ago by
shepherl
4.2k
1
vote
2
replies
1.8k
views
GO.db for Bioconductor 3.17
GO.db
devel
2.7 years ago
Amanda D. Clark
• 0
0
votes
0
replies
919
views
News:
Last day to make commits before Release 3.16
Release
Devel
Bioconductor
release
devel
3.0 years ago
shepherl
4.2k
0
votes
2
replies
1.3k
views
News:
List of Deprecated Packages for Bioc3.16
Release
Deprecation
Devel
Bioconductor
3.0 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release
Devel
Bioconductor
Software
3.1 years ago
shepherl
4.2k
4
votes
0
replies
1.2k
views
News:
Bioconductor Release 3.16 Schedule
Release
Devel
packages
release
devel
3.2 years ago • updated 3.1 years ago
shepherl
4.2k
0
votes
3
replies
1.3k
views
Package Review/Release Timeline
Devel
updated 3.4 years ago by
Gordon Smyth
53k • written 3.4 years ago by
Jonathan
• 0
0
votes
4
replies
1.8k
views
News:
List of Deprecated Packages for Bioc3.15
Devel
Deprecation
Release
Bioconductor
3.6 years ago • updated 3.0 years ago
shepherl
4.2k
0
votes
0
replies
981
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release
Software
Bioconductor
Devel
3.6 years ago
shepherl
4.2k
1
vote
0
replies
1.3k
views
News:
Bioconductor Release 3.15 Schedule
Devel
release
packages
Release
devel
3.7 years ago • updated 3.6 years ago
shepherl
4.2k
4
votes
2
replies
1.7k
views
GenomicRanges::union fails on R devel
devel
GenomicRanges
4.1 years ago
Guillaume Devailly
▴ 60
0
votes
2
replies
2.1k
views
unable to load shared object Rsamtools.dll':
Devel
updated 4.1 years ago by
Mike Smith
★ 6.6k • written 4.1 years ago by
Franck
• 0
1
vote
0
replies
1.4k
views
News:
Bioconductor Release 3.14 Schedule
devel
Devel
release
packages
Release
4.1 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
knitr ERROR on Biocondcutor builders
Devel
Bioconductor
Packages
BuildReport
devel
4.3 years ago
shepherl
4.2k
2
votes
9
replies
2.3k
views
New annotation package - no response from packages@bioconductor.org
Devel
devel
updated 4.4 years ago by
kayla.interdonato
▴ 160 • written 4.4 years ago by
athief
▴ 20
0
votes
0
replies
1.1k
views
News:
Last day to make commit before the RELEASE_3_13
Release
Devel
devel
release
Bioc3.13
4.5 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!
Bioconductor
release
devel
deadline
4.6 years ago • updated 4.5 years ago
shepherl
4.2k
0
votes
0
replies
1.3k
views
News:
Import Deadlines for RELEASE 3.11
release
devel
deadline
bioconductor
News
5.5 years ago
shepherl
4.2k
0
votes
0
replies
1.1k
views
News:
Deadline for devel branch 3.11 to pass R CMD build and R CMD check
release
devel
bioconductor
News
5.6 years ago
shepherl
4.2k
0
votes
0
replies
1.3k
views
News:
Important Deadlines for RELEASE
release
devel
deadline
News
updated 6.0 years ago by
Martin Morgan
25k • written 6.0 years ago by
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
Deadline for commits to current Release 3.9 Branch and Devel 3.10
release
freeze
deadline
devel
News
6.1 years ago
shepherl
4.2k
0
votes
1
reply
1.3k
views
News:
Deadline for devel branch 3.9 to pass R CMD build and R CMD check
release
devel
deadline
freeze
News
6.6 years ago
shepherl
4.2k
0
votes
1
reply
1.6k
views
News:
List of Deprecated Package Bioc 3.9
deprecate
release
devel
software
experimentdata
News
6.7 years ago
shepherl
4.2k
0
votes
1
reply
1.5k
views
News:
List of Deprecated Package Bioc 3.9
deprecate
release
software
devel
News
6.8 years ago
shepherl
4.2k
1
vote
0
replies
1.3k
views
News:
Deadline for devel branch 3.8 to pass R CMD build and R CMD check
deadline
release
devel
freeze
News
7.1 years ago
shepherl
4.2k
0
votes
0
replies
1.7k
views
News:
Dockers have been updated for Bioc3.6 and Bioc3.7
docker
bioconductor
release
devel
News
8.0 years ago
shepherl
4.2k
0
votes
1
reply
2.4k
views
Is there a way to change the name of R package that is already published on bioconductor?
r
developers
devel
updated 10.0 years ago by
Martin Morgan
25k • written 10.0 years ago by
MarcinKosiński
• 0
3
votes
1
reply
1.6k
views
Reverse the effect of useDevel()
bioconductor
devel
developers
updated 10.4 years ago by
Martin Morgan
25k • written 10.4 years ago by
andrew.j.skelton73
▴ 370
40 results • Page
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Comment: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
Comment: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
we can investigate this issue. thank you for bringing it to our attention
Comment: deseq2 filter the low counts
by
Michael Love
43k
> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…
Comment: deseq2 filter the low counts
by
empty_mt
• 0
Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …
Comment: deseq2 filter the low counts
by
Michael Love
43k
Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering
Votes
Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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