6 weeks ago • updated 29 days ago
shepherl
4.2k
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149
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2
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299
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796
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733
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12 months ago • updated 7 months ago
shepherl
4.2k
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360
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11
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2.5k
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20 months ago • updated 12 months ago
shepherl
4.2k
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written 2.9 years ago by
Robert Castelo
★
3.4k
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4.7k
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2.3 years ago • updated 18 months ago
shepherl
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1.2k
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2.6 years ago • updated 2.4 years ago
shepherl
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967
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2.5 years ago • updated 2.4 years ago
Franck RICHARD
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3
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1.8k
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updated 2.6 years ago by
darrelvanhoy
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0
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written 2.7 years ago by
shepherl
4.2k
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1.8k
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2.7 years ago
Amanda D. Clark
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1.3k
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3.0 years ago
shepherl
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3.1 years ago
shepherl
4.2k
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1.2k
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1.3k
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updated 3.4 years ago by
Gordon Smyth
53k
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written 3.4 years ago by
Jonathan
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1.8k
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3.6 years ago • updated 3.0 years ago
shepherl
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981
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3.6 years ago
shepherl
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4.1 years ago
Guillaume Devailly
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60
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2.1k
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updated 4.1 years ago by
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written 4.1 years ago by
Franck
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4.3 years ago
shepherl
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2.3k
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updated 4.4 years ago by
kayla.interdonato
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written 4.4 years ago by
athief
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1.2k
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4.6 years ago • updated 4.5 years ago
shepherl
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1.3k
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1.1k
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5.6 years ago
shepherl
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2.4k
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updated 10.0 years ago by
Martin Morgan
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written 10.0 years ago by
MarcinKosiński
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1.6k
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updated 10.4 years ago by
Martin Morgan
25k
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written 10.4 years ago by
andrew.j.skelton73
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370
Recent ...
Replies
Comment: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
Comment: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
we can investigate this issue. thank you for bringing it to our attention
Comment: deseq2 filter the low counts
by
Michael Love
43k
> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…
Comment: deseq2 filter the low counts
by
empty_mt
•
0
Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something?
I have 6 treatments, …
Comment: deseq2 filter the low counts
by
Michael Love
43k
Have you seen this part:
https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering
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