Showing : dnaseq • reset
0
votes
1
reply
319
views
Using DESeq2 for Analyzing AMR Gene Variations in Water Samples Post-Treatment
DESeq2 NanoporeRNASeq DNASeq
updated 3 months ago by 43k • written 3 months ago by • 0
0
votes
0
replies
786
views
Compare DNA sequence pairs and compute lengths and coordinates
DNASeq CNEr
2.9 years ago Md Abrar • 0
0
votes
4
replies
3.7k
views
transformation of csv file to fasta format with biostrings and r studio
DNASeq rstudio fasta Biostrings csv
3.3 years ago HELEN • 0
0
votes
0
replies
882
views
Job: Computational postdoctoral fellow for cancer disparities research (Boston University)
DNASeq RNASeq SingleCell
3.3 years ago camp ▴ 10
0
votes
0
replies
752
views
Error in fragEnds[, 1] : incorrect number of dimensions while using printWigFile function in Basic4Cseq package
GenomicInteractions Basic4Cseq DNASeq GenomicFiles
3.4 years ago koushik • 0
0
votes
0
replies
1.1k
views
Doubt about the interpretation of cn.mops tumor vs normal results
cn.mops dnaseq bioinformatics
6.3 years ago Cased • 0
2
votes
3
replies
1.7k
views
Doubt about WL in cn.mops
dnacopy dnaseq genomic cn.mops cnv
updated 6.4 years ago by ▴ 540 • written 6.4 years ago by • 0
0
votes
1
reply
1.2k
views
How to identify Disease biomarkers " DNA sequences as biomarkers "
dnaseq pathway analysis protein biomarkers
6.8 years ago emadelhewihy • 0
0
votes
1
reply
1.4k
views
why merged paired end reads still have strand infomation?
dnaseq rtracklayer paired-end reads
7.4 years ago zwfanwz678 • 0
0
votes
0
replies
1.2k
views
Centipede foot printing export
footprinting centipede atac-seq dnaseq
7.7 years ago rbronste ▴ 60
0
votes
0
replies
1.4k
views
any ideas on a workflow for exome seq data analysis with R?
exome dnaseq WES
8.5 years ago arvand.akbari • 0
0
votes
0
replies
2.0k
views
Job: Bioinformatics Analyst at University of Cambridge, Cancer Research UK Cambridge Institute
job jobs rnaseq chipseq dnaseq Job
9.2 years ago Rory Stark ★ 5.2k
3
votes
2
replies
1.5k
views
Get a complete view of a long DNA sequence of a Biostrings object in R
biostrings subsetting View dnastring dnaseq
updated 9.2 years ago by 67k • written 9.2 years ago by • 0
0
votes
1
reply
1.6k
views
Newbie - Adding Labels to Individual Genes with ggbio?
r ggbio ggplot2 dnaseq genomicranges
updated 9.4 years ago by ▴ 130 • written 9.4 years ago by • 0
8
votes
9
replies
6.6k
views
ChIPseq-style peak calling for paired-end sequencing?
Chipseq DNAseq ATAC bayespeak narrowpeaks
updated 9.5 years ago by 51k • written 9.5 years ago by ▴ 140
9
votes
8
replies
9.2k
views
DEseq2 extended to open chromatin anlaysis: normalization, dispersion fit, and "too many" differences
deseq2 dnaseq
updated 10.2 years ago by 43k • written 10.2 years ago by ▴ 100
1
vote
0
replies
1.6k
views
Bioconductor Employment: Statistical Research Associate
DNASeq Cancer DNASeq Cancer
13.0 years ago Martin Morgan 25k
17 results • Page 1 of 1
Recent ...
Replies
Answer: Deseq2 res Function by Michael Love 43k
> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…
Answer: ANOVA like approach of edgeR by Gordon Smyth 51k
You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…
Answer: Create Illmina bead summary data by Gordon Smyth 51k
GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…
Comment: Help with RSEM counts: do I transpose matrix? by NB • 0
OK thank you.
Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k
You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.
Votes
Answer: Deseq2 res Function
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
Answer: ANOVA like approach of edgeR
Answer: ANOVA like approach of edgeR
Comment: ANOVA like approach of edgeR
Awards • All
Popular Question to sap275 ▴ 10
Popular Question to mhem ▴ 10
Popular Question to Anna ▴ 20
Scholar to Haibo Liu ▴ 20
Popular Question to Talip ▴ 10
Locations • All
France, 7 minutes ago
The city by the bay, 13 minutes ago
Australia, 58 minutes ago
WEHI, Melbourne, Australia, 1 hour ago
Russia, 1 hour ago
Traffic: 485 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6