Bioconductor Igraph

Showing : igraph • reset

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621

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GRanges igraph

updated 15 months ago by Lluís Revilla Sancho ▴ 730 • written 15 months ago by Bogdan ▴ 670

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528

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WGCNA igraph

17 months ago María José • 0

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1.1k

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igraph networkanalysis Phylogenetics phyloseq

3.3 years ago Chantel • 0

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2.9k

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R 3.6.2 update problems with igraph and phangorn update Phyloseq igraph phangorn Tutorial

updated 4.4 years ago by Martin Morgan 25k • written 4.4 years ago by crgarcia • 0

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1.5k

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igraph network gene corexpression rna-seq

updated 2.7 years ago by Gordon Smyth 50k • written 5.1 years ago by aiswaryabioinfo • 0

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1.2k

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STRINGdb igraph

5.1 years ago Samuel Lee • 0

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1.4k

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scater scran igraph scRNA-Seq rots

updated 5.2 years ago by Aaron Lun ★ 28k • written 5.2 years ago by hamza_karakurt ▴ 50

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904

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igraph miR2Pathway Pathway page_rank

updated 6.1 years ago by Martin Morgan 25k • written 6.1 years ago by genomic8328 ▴ 10

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988

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graph pathways igraph

6.1 years ago genomic8328 ▴ 10

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3.3k

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igraph

6.5 years ago Andrew Box ▴ 10

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1.5k

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QuACN igraph

6.7 years ago lljotall ▴ 10

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1.6k

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installation package installation topaseq igraph LD_LIBRARY_PATH

7.3 years ago jan.soderman • 0

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961

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ppi network analysis igraph

7.9 years ago Abhishek Pratap ▴ 190

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1.2k

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igraph software error adjacency matrix

updated 8.0 years ago by Paul Shannon ▴ 470 • written 8.0 years ago by Angel ▴ 40

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1.1k

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RamiGO R gene ontology igraph

8.2 years ago bkellman • 0

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2.7k

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igraph

updated 8.3 years ago by Hervé Pagès 16k • written 8.3 years ago by Angel ▴ 40

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2.0k

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igraph spade

updated 6.9 years ago by johnheath346 • 0 • written 8.4 years ago by duncanjamesmurray01 • 0

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1.9k

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FEM igraph

updated 8.5 years ago by andrew • 0 • written 8.5 years ago by sirintra ▴ 10

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2.0k

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software error geNet igraph genetclassifier

updated 8.8 years ago by saibar ▴ 20 • written 8.8 years ago by alakatos ▴ 130

19 results • Page 1 of 1

Recent ...

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Comment: Once again a "Model matrix not full rank" by James W. MacDonald 65k

You already ran a temporal assay. Now you can compare each time point to the baseline. The interaction term is only applicable if you have…

Comment: Timecourse RNASeq analysis by Aurora • 0

I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…

Comment: Once again a "Model matrix not full rank" by arfranco ▴ 130

But.. How to run a temporal assay?

Comment: Deseq2 and Normalization of RNA sequencing data by kcarey • 0

Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …

Answer: NEED FOR NESSASORY HELP by Gordon Smyth 50k

Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…

Votes

A: Print Differentially Expressed Exons From Dexseq Results

stuck on unimplemented type 'list' in 'EncodeElement'

Bioconductor 3.19 is Released!

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

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