Showing : impute • reset
0
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3
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276
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impute.knn produces different results based on matrix order
impute
updated 9 weeks ago by 65k • written 9 weeks ago by • 0
1
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2
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306
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Impute does not work
impute
9 weeks ago Laura • 0
1
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4
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6.1k
views
Error loading impute(): '/usr/lib/libgfortran.5.dylib' (no such file)
Install impute
updated 12 months ago by • 0 • written 2.2 years ago by • 0
0
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0
replies
800
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Introduction to DEP - data imputation
DEP impute
2.7 years ago catherine.li • 0
0
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1
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1.6k
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Removing batch effect by sva or combat and subsequent correlation analysis by WGCNA
WGCNA impute sva
updated 3.0 years ago by ▴ 50 • written 3.0 years ago by • 0
2
votes
3
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2.1k
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Imputation method selection (mass spectrometry) bimodal distribution
impute missing value imputation DEP massspectrometry
updated 6.4 years ago by 1.6k • written 6.4 years ago by ▴ 60
2
votes
3
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1.6k
views
champ.impute doesn't update beta matrix
champ impute bioconductor
updated 7.1 years ago by ▴ 90 • written 7.1 years ago by ▴ 10
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0
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1.1k
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Bugs for impute package
bugs impute
7.6 years ago Shicheng Guo • 0
0
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0
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1.5k
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Possible methodologies for missing value imputation of continuous variables in a data frame in R
missing data missing value imputation impute MICE bioconductor
8.6 years ago svlachavas ▴ 830
1
vote
5
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2.8k
views
Using Limma for proteomics (2D DIGE) datasets
Proteomics limma impute limmaGUI Proteomics limma impute limmaGUI
updated 8.8 years ago by • 0 • written 14.6 years ago by ▴ 60
1
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5
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1.7k
views
Linear model after imputation (impute.knn function)
impute
updated 8.9 years ago by 50k • written 8.9 years ago by ▴ 10
0
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3
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3.6k
views
Error installing impute package
GUI impute DNAcopy GUI impute DNAcopy
updated 9.9 years ago by ★ 8.2k • written 9.9 years ago by ▴ 80
0
votes
2
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1.3k
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Tigre Package question 3
Microarray impute PROcess convert mmgmos puma tigre trigger Microarray impute PROcess
updated 10.2 years ago by ▴ 60 • written 10.2 years ago by ▴ 50
0
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0
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971
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FW: Tigre Package question 3
impute PROcess mmgmos puma impute PROcess mmgmos puma
10.2 years ago Solanki, Anisha ▴ 60
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2.1k
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sva/ComBat with missing values?
impute impute
10.6 years ago W. Evan Johnson ▴ 850
0
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3
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1.4k
views
Error installing (some) Bioconductor packages on Mac OSX under R-3.0.0?
GUI impute DNAcopy GUI impute DNAcopy
updated 11.1 years ago by ★ 8.2k • written 11.1 years ago by ★ 3.0k
0
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3
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2.9k
views
Error installing impute package
impute impute
updated 11.1 years ago by ▴ 870 • written 11.1 years ago by ★ 3.0k
0
votes
1
reply
1.9k
views
impute package
impute impute
updated 11.6 years ago by 25k • written 11.6 years ago by ▴ 10
0
votes
1
reply
2.9k
views
Error using impute.knn function
Microarray Normalization impute Microarray Normalization impute
11.8 years ago Peter Davidsen ▴ 210
0
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2
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1.4k
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Error when using impute to get missing values
impute ArrayExpress impute ArrayExpress
updated 12.1 years ago by ★ 4.2k • written 12.1 years ago by ▴ 10
0
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1
reply
1.3k
views
impute.knn
impute impute
updated 12.2 years ago by ★ 4.2k • written 12.2 years ago by ▴ 290
0
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2
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6.0k
views
impute package
impute BiocInstaller impute BiocInstaller
updated 12.2 years ago by 25k • written 12.2 years ago by ▴ 10
0
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1
reply
1.3k
views
CRAN packages maintained by you
hexbin gpls RBGL impute Icens hopach maanova RLMM CORREP cycle hexbin gpls RBGL Icens
updated 12.5 years ago by ▴ 430 • written 12.5 years ago by ▴ 10
0
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4
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2.1k
views
How is fold change reported in the samr output?
siggenes impute siggenes impute
updated 13.6 years ago by 65k • written 13.6 years ago by ▴ 20
0
votes
0
replies
1.1k
views
DNAcopy
aCGH impute DNAcopy aCGH snapCGH CGHcall aCGH impute DNAcopy aCGH snapCGH CGHcall
14.3 years ago Daniel Rico ▴ 110
0
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0
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904
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pcaMethods and categorical NAs
impute impute
14.3 years ago Antoni Picornell ▴ 40
0
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2
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2.4k
views
Genotype imputation
impute impute
updated 14.5 years ago by ▴ 270 • written 14.5 years ago by ▴ 40
0
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2
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1.4k
views
A list, a matrix and impute.knn for making data for SAMR
Microarray impute Microarray impute
updated 14.7 years ago by ▴ 60 • written 14.7 years ago by ▴ 90
0
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2
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1.1k
views
How to display chromosome rapresentation ?
CGH impute CGH impute
updated 15.1 years ago by 21k • written 15.1 years ago by ▴ 540
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0
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1.6k
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when to impute the missing value?
impute pcaMethods impute pcaMethods
16.5 years ago De-Jian ZHAO ▴ 240
0
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1
reply
1.0k
views
Analysis of many Flagged spots
limma impute limma impute
updated 16.7 years ago by ▴ 40 • written 16.7 years ago by ★ 1.9k
0
votes
1
reply
1.2k
views
Imputation problem in aCGH
aCGH Biobase multtest impute aCGH aCGH Biobase multtest impute aCGH
16.8 years ago Benjamin Otto ▴ 830
0
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0
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1.0k
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verification
GO limma impute oligo makePlatformDesign crlmm GO limma impute oligo makePlatformDesign
17.2 years ago Vasiliki Xiarchou ▴ 10
0
votes
3
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1.1k
views
Unable to compile the impute package on debian with gcc 4.1
Cancer impute Cancer impute
updated 17.2 years ago by ▴ 60 • written 17.2 years ago by ★ 7.4k
0
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0
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956
views
Unable to compile the impute package on debian with gcc 4.1
impute impute
17.2 years ago Sebastian Bauer ▴ 60
0
votes
2
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1.2k
views
imputing missing data for 70mer array platform, need advice
aCGH CGH multtest impute aCGH oligo aCGH CGH multtest impute aCGH oligo
updated 17.3 years ago by 21k • written 17.3 years ago by ▴ 50
0
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0
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1.1k
views
aCGH
aCGH CGH impute aCGH aCGH CGH impute aCGH
17.4 years ago Sean Davis 21k
0
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2
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1.7k
views
knn.imput and prcomp error
Microarray impute Microarray impute
updated 17.6 years ago by 65k • written 17.6 years ago by ▴ 30
0
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0
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972
views
Re: Re: segmentation error in pamr.knnimpute
pamr impute pamr impute
19.0 years ago Alice Le Bars ▴ 40
0
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1
reply
1.8k
views
problem with impute.knn in the impute package
Clustering impute Clustering impute
updated 19.0 years ago by ▴ 360 • written 19.0 years ago by ▴ 150
0
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0
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1.2k
views
problem with impute.knn in the impute package
Clustering impute Clustering impute
19.0 years ago He, Yiwen NIH/CIT ▴ 360
0
votes
0
replies
1.3k
views
Problems with aCGH package
aCGH Genetics Cancer CGH impute aCGH aCGH Genetics Cancer CGH impute aCGH
19.9 years ago grischa tödt ▴ 30
0
votes
3
replies
1.3k
views
Recent changes to Bioconductor packages
reposTools graph Rgraphviz simpleaffy impute reposTools graph Rgraphviz simpleaffy impute
20.3 years ago • updated 20.2 years ago madman@jimmy.harvard.edu ▴ 850
0
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2
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1.2k
views
Handling Missing Values
impute impute
updated 21.5 years ago by ★ 1.0k • written 21.5 years ago by ▴ 110
44 results • Page 1 of 1
Recent ...
Replies
Answer: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0
Hi Michael, I think there is something wrong with the generation of nullranges. I was working with small RNA and methylation overlaps. …
Answer: Once again a "Model matrix not full rank" by swbarnes2 ★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results? by Gordon Smyth 50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k
It is true that goseq isn't available for Bioc 3.19 (as at 4 May 2024). In the meantime, you could consider using the goana() and kegga() …
Answer: limma Intercept vs No-intercept models completely changing DMR results? by James W. MacDonald 65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Votes
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
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