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protein
•
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0
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609
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Database/tool that is able to tell me if the glutathionylation of a protein inhibits it?
protein
database
glutathionylation
PTM
3.6 years ago
Camelia
• 0
0
votes
1
reply
1.3k
views
Normalisation of protein micro array data using VSN
microarray
normalization
protein
updated 4.3 years ago by
Wolfgang Huber
★ 13k • written 5.7 years ago by
keniajin
• 0
2
votes
2
replies
1.6k
views
Can't display protein domain data from UCSC table unipDomain using Gviz
Gviz
protein
visualization
UcscTrack
protein domains
updated 4.4 years ago by
James W. MacDonald
68k • written 4.4 years ago by
paul.jaschke
▴ 10
1
vote
4
replies
1.2k
views
package to analyze generic protein microarray data
microarray
protein
analysis
ProteomeProfiler
updated 5.0 years ago by
Gordon Smyth
52k • written 5.0 years ago by
hcnbox
• 0
0
votes
15
replies
3.1k
views
Is the STRINGdb server down?
STRINGdb
R
protein
updated 5.7 years ago by
zhanghongjie000
• 0 • written 5.9 years ago by
shahroze786
• 0
0
votes
1
reply
1.0k
views
Annotating protein sequences
Protein
iranges
sequencing
5.9 years ago
ieuangw
• 0
0
votes
1
reply
1.2k
views
Protein pathway analysis -- Classify, organize, and cluster a list of proteins / discovering relations between a set of proteins and linking them to …
protein
disease
pathway analysis
pathways
6.6 years ago
ረ
• 0
0
votes
1
reply
1.3k
views
How to identify Disease biomarkers " DNA sequences as biomarkers "
dnaseq
pathway analysis
protein
biomarkers
7.0 years ago
emadelhewihy
• 0
0
votes
0
replies
1.1k
views
batch blast matrix of protein sequences from R
R
blast
blastsequences
protein
7.1 years ago
andres.susrud
• 0
2
votes
4
replies
1.7k
views
plotting proteases digestion points in a protein
biostrings
iranges
sequence
alignment
protein
updated 8.0 years ago by
Michael Lawrence
★ 11k • written 8.0 years ago by
Assa Yeroslaviz
★ 1.5k
1
vote
2
replies
2.6k
views
Wrong protein sequence fetched with R's Biostrings readDNAStringSet function
biostrings
fasta
protein
updated 8.1 years ago by
James W. MacDonald
68k • written 8.1 years ago by
fastabest
• 0
1
vote
7
replies
2.6k
views
Can XCMS output continuum/profile data to netCDF format?
xcms
convert
protein
updated 8.2 years ago by
Johannes Rainer
★ 2.1k • written 8.2 years ago by
ray.bacala
• 0
0
votes
0
replies
1.4k
views
Job:
PhD Position in Bioinformatics
bioinformatics
protein
variantannotation
data integration
Job
8.3 years ago
stephan.pabinger
• 0
0
votes
5
replies
1.6k
views
Splitting a fasta file based on specific Amino acid for plotting
iranges
biostrings
fasta
protein
readaastringset
updated 8.3 years ago by
Michael Lawrence
★ 11k • written 8.3 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
0
replies
2.0k
views
Producing alternate protein sequences from VCF
protein
vcf
9.8 years ago
dan.gatti
• 0
15 results • Page
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Answer: SingleR with multiple single cell references
by
Aaron Lun
★ 28k
> Is it necessary to piece together the individual steps manually (e.g. aggregateReference, trainSingleR, classifySingleR, combineRecompute…
Answer: Automatically install dependencies
by
ATpoint
★ 4.7k
The BiocManager, which is sort of an extended wrapper around `install.packages`, installs all R dependencies. If you see errors then this i…
Answer: To count or not to count multi-overlapping reads?
by
Gordon Smyth
52k
> How does it handle reads that map to a gene that is located in a region that also has another gene but on the alternate strand? Overlapp…
Comment: Weird p-values using DESeq2?
by
ATpoint
★ 4.7k
This does not look like normalized counts but raw counts. Consider using `counts(dds, normalized = TRUE)` or the output of `normTransform()…
Answer: Weird p-values using DESeq2?
by
Wolfgang Huber
★ 13k
Dear Ingrid, thank you for asking. Can you provide the input count matrix (you can "pseudonymize" the biological conditions and the gene n…
Votes
A: Fraction count for multi mapping reads; how to generate input file for Deseq2 fo
Comment: Weird p-values using DESeq2?
Comment: Overcoming confounding in batch effect correction
Answer: Store Matrix in DataFrame Cell
Answer: enrichGOgradient color change
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