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protein
•
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0
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0
replies
784
views
Database/tool that is able to tell me if the glutathionylation of a protein inhibits it?
protein
database
glutathionylation
PTM
4.3 years ago
Camelia
• 0
0
votes
1
reply
1.5k
views
Normalisation of protein micro array data using VSN
microarray
normalization
protein
updated 5.0 years ago by
Wolfgang Huber
★ 13k • written 6.4 years ago by
keniajin
• 0
2
votes
2
replies
1.8k
views
Can't display protein domain data from UCSC table unipDomain using Gviz
Gviz
protein
visualization
UcscTrack
protein domains
updated 5.1 years ago by
James W. MacDonald
68k • written 5.1 years ago by
paul.jaschke
▴ 10
1
vote
4
replies
1.6k
views
package to analyze generic protein microarray data
microarray
protein
analysis
ProteomeProfiler
updated 5.6 years ago by
Gordon Smyth
53k • written 5.6 years ago by
hcnbox
• 0
0
votes
15
replies
3.6k
views
Is the STRINGdb server down?
STRINGdb
R
protein
updated 6.4 years ago by
zhanghongjie000
• 0 • written 6.6 years ago by
shahroze786
• 0
0
votes
1
reply
1.2k
views
Annotating protein sequences
Protein
iranges
sequencing
6.6 years ago
ieuangw
• 0
0
votes
1
reply
1.4k
views
Protein pathway analysis -- Classify, organize, and cluster a list of proteins / discovering relations between a set of proteins and linking them to …
protein
disease
pathway analysis
pathways
7.3 years ago
ረ
• 0
0
votes
1
reply
1.4k
views
How to identify Disease biomarkers " DNA sequences as biomarkers "
dnaseq
pathway analysis
protein
biomarkers
7.7 years ago
emadelhewihy
• 0
0
votes
0
replies
1.3k
views
batch blast matrix of protein sequences from R
R
blast
blastsequences
protein
7.8 years ago
andres.susrud
• 0
2
votes
4
replies
1.9k
views
plotting proteases digestion points in a protein
biostrings
iranges
sequence
alignment
protein
updated 8.7 years ago by
Michael Lawrence
★ 11k • written 8.7 years ago by
Assa Yeroslaviz
★ 1.5k
1
vote
2
replies
3.1k
views
Wrong protein sequence fetched with R's Biostrings readDNAStringSet function
biostrings
fasta
protein
updated 8.8 years ago by
James W. MacDonald
68k • written 8.8 years ago by
fastabest
• 0
1
vote
7
replies
2.9k
views
Can XCMS output continuum/profile data to netCDF format?
xcms
convert
protein
updated 8.9 years ago by
Johannes Rainer
★ 2.1k • written 8.9 years ago by
ray.bacala
• 0
0
votes
0
replies
1.5k
views
Job:
PhD Position in Bioinformatics
bioinformatics
protein
variantannotation
data integration
Job
9.0 years ago
stephan.pabinger
• 0
0
votes
5
replies
1.9k
views
Splitting a fasta file based on specific Amino acid for plotting
iranges
biostrings
fasta
protein
readaastringset
updated 9.0 years ago by
Michael Lawrence
★ 11k • written 9.0 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
0
replies
2.1k
views
Producing alternate protein sequences from VCF
protein
vcf
10.5 years ago
dan.gatti
• 0
15 results • Page
1 of 1
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Replies
Comment: Using DESeq2 for age prediction
by
ATpoint
★ 5.0k
You sure will find online tutorials on regression models / machine learning classifiers. The support site is for help with Bioconductor. Ch…
Comment: Using DESeq2 for age prediction
by
picasa1983
• 0
Thanks ! Do you have any idea how to do that ?
Answer: Using DESeq2 for age prediction
by
ATpoint
★ 5.0k
The package has no such inbuilt function but you are free to use the vst (or any normalized) counts to train a regression model or classifi…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
Aaron already answered your question. If you have an HDF5 file, it will be read in as a `TENxMatrix` object, which isn't actually read in -…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
dan.gatti
• 0
Very strange. We have the same package versions. I tried adding the mtx.class, type, and delayed arguments, but it's still making the coun…
Votes
A: Multi-level experiments in Limma
Answer: Should voomWithQualityWeights still be used when the sample-specific weights var
Answer: DESeq2 for candidate gene analysis
DESeq2 for candidate gene analysis
Answer: DESeq2 for candidate gene analysis
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