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stringdb
•
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0
votes
6
replies
702
views
StringDB: Cannot finish their tutorial because of an error
STRINGdb
updated 7 weeks ago by
qianyi13
• 0 • written 9 weeks ago by
Pavel
• 0
0
votes
2
replies
341
views
StringDB: Cannot use payload mechanism to colour nodes
RNASeqData
STRINGdb
DifferentialExpression
GraphAndNetwork
Network
4 months ago
Luca
• 0
2
votes
5
replies
1.0k
views
STRINGdb R package reference class instantiation with v12.0
STRINGdb
updated 27 days ago by
damian.szk
▴ 80 • written 5 months ago by
Abhishek
• 0
0
votes
1
reply
296
views
Specifying evidence channels in STRINGdb
STRINGdb
stringdb
7 months ago
robynne.braun
• 0
0
votes
7
replies
1.1k
views
Cannot open URL for StringDB protein.links.v11.5/9606.protein.links.v11.5.txt.gz
STRINGdb
updated 8 months ago by
damian.szk
▴ 80 • written 8 months ago by
Furkan
• 0
0
votes
0
replies
418
views
Issues setting background in STRINGdb
STRINGdb
MSstats
10 months ago
samsiljee
• 0
2
votes
2
replies
1.0k
views
STRINGdb offline use (via input_directory argument)
STRINGdb
14 months ago
Charlotte Soneson
▴ 170
2
votes
3
replies
887
views
Potential bug in STRINGdb$get_aliases()
STRINGdb
24 months ago
AstrobioMike
• 0
1
vote
2
replies
1.0k
views
Filter proteins with known interactions from STRINGdb R package
STRINGdb
2.1 years ago
Abhishek
• 0
2
votes
4
replies
1.7k
views
STRINGdb string_db$map error
STRINGdb
HELP
updated 15 months ago by
Rodrigo
▴ 10 • written 2.2 years ago by
Jessica
▴ 10
0
votes
6
replies
2.0k
views
STRINGdb : error with string_db$plot_network()
STRINGdb
2.3 years ago • updated 2.2 years ago
Wolfgang RAFFELSBERGER
▴ 140
2
votes
9
replies
2.1k
views
STRINGdb images very low quality?
STRINGdb
updated 2.3 years ago by
damian.szk
▴ 80 • written 2.4 years ago by
jarod
▴ 30
3
votes
4
replies
2.2k
views
STRINGdb: Error in download.file(urlStr, temp)
STRINGdb
R
updated 2.3 years ago by
damian.szk
▴ 80 • written 2.5 years ago by
qardessio
▴ 10
0
votes
3
replies
1.3k
views
STRINGdb : accessing all types of (sub-)scores from interactions
STRINGdb
updated 2.7 years ago by
damian.szk
▴ 80 • written 2.7 years ago by
Wolfgang RAFFELSBERGER
▴ 140
0
votes
1
reply
742
views
Error in mapping the gene names to the STRINGdb identifiers
PPI
STRINGdb
updated 2.7 years ago by
damian.szk
▴ 80 • written 2.7 years ago by
Ashish Jain
▴ 10
0
votes
0
replies
840
views
R: STRINGdb, from get_enrichment() function how to get background gene list that are related to pathways?
R
STRINGdb
2.9 years ago
choijamts
• 0
0
votes
1
reply
1.6k
views
Network analysis: Is low confidence score valid (STRING DB)
STRINGdb
Network
updated 2.9 years ago by
Kevin Blighe
★ 3.9k • written 2.9 years ago by
Saransh
• 0
1
vote
1
reply
916
views
How to find the source code of the package STRINGdb ?
STRINGdb
Bioconductor
updated 3.2 years ago by
shepherl
3.9k • written 3.2 years ago by
deepue
▴ 10
0
votes
1
reply
783
views
How can I download all supported species information table of STRINGdb V11
STRINGdb
STRING
updated 3.4 years ago by
Vincent J. Carey, Jr.
6.7k • written 3.4 years ago by
Evan-GIBH
• 0
0
votes
15
replies
2.5k
views
Is the STRINGdb server down?
STRINGdb
R
protein
updated 4.9 years ago by
zhanghongjie000
• 0 • written 5.1 years ago by
shahroze786
• 0
2
votes
4
replies
1.5k
views
Can't create STRINGdb v11 object using STRINGdb packages methods
stringdb
4.9 years ago
Moosa
• 0
0
votes
2
replies
1.2k
views
STRING_id mismatch with STRINGdb
STRINGdb
igraph
5.1 years ago
Samuel Lee
• 0
0
votes
1
reply
989
views
STRINGdb: enrichment function raises error
STRINGdb
stringdb
gene set enrichment analysis
software error
go
5.4 years ago
wsciekly.maciek
▴ 10
0
votes
1
reply
843
views
error with STRINGdb package to download the graph
stringdb
R
5.8 years ago
Salvo88
▴ 20
0
votes
1
reply
960
views
How to download All Protein Protein Interactions of an organism with Bioconductor
ppi
stringdb
mus musculus
updated 6.1 years ago by
damian.szk
▴ 80 • written 6.1 years ago by
hkarakurt
▴ 20
0
votes
4
replies
1.4k
views
problem with get_link function
STRINGdb
get_link
bug
6.3 years ago
cristinapasi
• 0
0
votes
0
replies
1.0k
views
Problem with link generated with R using the string_db$get_link
stringdb
7.0 years ago
Ilario De Toma
▴ 10
0
votes
3
replies
2.4k
views
unable to connect to 'string.uzh.ch' on port 80
STRINGdb
vignette
updated 7.0 years ago by
Gregor Rot
▴ 10 • written 7.0 years ago by
mwinerip
• 0
1
vote
2
replies
1.3k
views
string-db.org link not working in generated graphic
STRINGdb
7.4 years ago • updated 7.3 years ago
florian.reisinger
• 0
0
votes
1
reply
1.4k
views
Plotting protein-protein interaction enrichment with STRINGdb
stringdb
error
7.6 years ago
Lluís Revilla Sancho
▴ 730
1
vote
2
replies
1.8k
views
How to export a STRINGDB network to XML
STRINGdb
updated 9.0 years ago by
atariw
▴ 10 • written 9.0 years ago by
Aditya
▴ 160
31 results • Page
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kcarey
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Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
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Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
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Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
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Comment: Once again a "Model matrix not full rank"
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In that case both time and treatment are identical things, so choose one and go with it.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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