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BioCAsia, 5-6th December 2019, Sydney, Australia
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4.9 years ago
Peter Hickey
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May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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6.3 years ago
mnchoi67
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Beginner's guide to DESeq2 pdf link broken
deseq2
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updated 9.5 years ago by
Michael Love
41k • written 9.6 years ago by
sunshinne
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NGS data analysis training courses at EMBL-EBI
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9.3 years ago
gr231
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Services/Outreach orientend bioinformatics positions at EMBL - Heidelberg
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9.2 years ago
Wolfgang Huber
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Course Announcement - Next Generation Data Analysis with R/Bioc (Dec 5-8, 2014)
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9.6 years ago
Thomas Girke
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Course: Statistics and Computing in Genome Data Science, July 10-15, 2016
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Martin Morgan
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BioCAsia, 29-30th November 2018, Melbourne, Australia
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updated 5.4 years ago by
Gordon Smyth
50k • written 5.7 years ago by
Steve Pederson
▴ 170
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LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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6.3 years ago
mnchoi67
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Help with neuroblastoma working group
Training
updated 8.7 years ago by
Vincent J. Carey, Jr.
6.7k • written 8.7 years ago by
paul.mineau
▴ 10
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News:
RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
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12 months ago
Maria Doyle
▴ 70
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Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
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12 months ago
Maria Doyle
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12 months ago
Maria Doyle
▴ 70
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Comment: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed): ``` limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
HAK
• 0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
ATpoint
★ 4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Comment: Store output of matchPWM()
by
James W. MacDonald
65k
Here's a self contained reproducible example, using part of the example in `?matchPWM` ``` > library(Biostrings) > data(HNF4alpha) > libr…
Comment: DEseq2 coefficient
by
JKim
• 0
Hi Dr. Love, I'm sorry to ask another question to my old post. If the design isn't balanced, the interpretation of coefficients will be…
Votes
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
Make custom Txdb class objects from Txdb
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