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wgcna
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question on visANT after WGCNA
wgcna
visant
module
hub genes
updated 9.8 years ago by
etycksen
• 0 • written 9.8 years ago by
agattorosso
• 0
2
votes
7
replies
5.7k
views
How to create "trait data" file for WGCNA
wgcna
coexpression
correlation
microarray
updated 9.9 years ago by
Peter Langfelder
★ 3.0k • written 9.9 years ago by
shalinisonar13
▴ 20
1
vote
2
replies
5.5k
views
WGCNA distance measures, clustering with TOM based on adjacency matrix type = "distance" versus correlation
wgcna
microarray
clustering
updated 9.9 years ago by
Peter Langfelder
★ 3.0k • written 9.9 years ago by
krr
• 0
0
votes
2
replies
6.1k
views
WGCNA - problems picking a suitable power
WGCNA
pickSoftThreshold
power
RNA-Seq
updated 9.9 years ago by
Peter Langfelder
★ 3.0k • written 9.9 years ago by
mrodrigues.fernanda
▴ 10
1
vote
0
replies
1.8k
views
Trouble pickSoftThreshold() large dataset WGCNA
r
wgcna
9.9 years ago
sventhedestroyer
▴ 10
5
votes
1
reply
2.3k
views
WGCNA - looking for over-representation of DEGs within gene networks
wgcna
r
differential gene expression
bioconductor
updated 10.0 years ago by
Peter Langfelder
★ 3.0k • written 10.0 years ago by
sm15766
▴ 30
0
votes
2
replies
3.3k
views
WGCNA - Using real data for tutorial III
pathways
wgcna
network
rna-seq
10.0 years ago
hywel.williams
• 0
3
votes
5
replies
8.7k
views
WGCNA HELP - Error: REAL() can only be applied to a 'numeric', not a 'integer'
wgcna
rnaseq
R
bioconductor
updated 10.0 years ago by
Peter Langfelder
★ 3.0k • written 10.0 years ago by
sm15766
▴ 30
0
votes
1
reply
3.3k
views
WGCNA data format?
WGCNA
coexpression
microarray
updated 10.1 years ago by
Peter Langfelder
★ 3.0k • written 10.1 years ago by
michael.ridley6
• 0
4
votes
2
replies
4.1k
views
WGCNA: Relating Modules to Categorical External Traits
WGCNA
BetweenGroupComparison
10.1 years ago
mjc5038
▴ 30
1
vote
2
replies
2.4k
views
problem with WGCNA script: dissTOM
wgcna
updated 10.2 years ago by
Peter Langfelder
★ 3.0k • written 10.2 years ago by
agattorosso
• 0
4
votes
6
replies
6.6k
views
WGCNA automatic vs manual network creation
WGCNA
updated 10.2 years ago by
Peter Langfelder
★ 3.0k • written 10.2 years ago by
akridgerunner
▴ 30
2
votes
3
replies
6.0k
views
WGCNA "bicor" correlation
wgcna
bicor
WGCNA
10.2 years ago
bcbio_uk
▴ 10
0
votes
0
replies
1.2k
views
How many probesets/genes can WGCNA handle?
wgcna
10.3 years ago
mahes.muniandy
• 0
8
votes
17
replies
18k
views
WGCNA for RNA-Seq Sample Set, Outliers, and Spearman correlation
WGCNA
Sample Size
Outliers
updated 10.3 years ago by
mh.manoj
• 0 • written 10.9 years ago by
brohawndg
▴ 150
0
votes
6
replies
6.1k
views
WGCNA network creation error
WGCNA
updated 3.9 years ago by
Peter Langfelder
★ 3.0k • written 10.4 years ago by
akridgerunner
▴ 30
13
votes
1
reply
6.0k
views
WGCNA - Compare module preservation between class
WGCNA
coexpression
updated 10.4 years ago by
Peter Langfelder
★ 3.0k • written 10.4 years ago by
abellonau
▴ 60
0
votes
0
replies
1.5k
views
WGCNA soft connectivity vs intramodular connectivity
WGCNA
10.5 years ago
akridgerunner
▴ 30
1
vote
1
reply
1.6k
views
WGNCA colors for bar plots
WGCNA
updated 10.5 years ago by
Peter Langfelder
★ 3.0k • written 10.5 years ago by
akridgerunner
▴ 30
3
votes
6
replies
3.6k
views
WGCNA normalized CDF to use, WGCNA Intramodular connectivity
wgcna
affymetrix microarrays
affy
updated 10.5 years ago by
Peter Langfelder
★ 3.0k • written 10.6 years ago by
akridgerunner
▴ 30
14
votes
4
replies
17k
views
WGCNA Hub Gene Selection Method
WGCNA
Hub Genes
KmE
Intramodular Connectivity
updated 10.5 years ago by
Peter Langfelder
★ 3.0k • written 10.5 years ago by
brohawndg
▴ 150
2
votes
3
replies
3.4k
views
WGCNA cytoscape export question
WGCNA
updated 10.5 years ago by
Peter Langfelder
★ 3.0k • written 10.5 years ago by
akridgerunner
▴ 30
0
votes
1
reply
3.0k
views
WGCNA corrupt TOM fails to export to Cytoscape
wgcna
updated 10.5 years ago by
Peter Langfelder
★ 3.0k • written 10.5 years ago by
akridgerunner
▴ 30
4
votes
5
replies
7.4k
views
WGCNA Tutorial Selection
wgcna
coexpression
updated 10.5 years ago by
Dan Tenenbaum
★ 8.2k • written 10.6 years ago by
ctruongctruong
▴ 10
2
votes
3
replies
3.4k
views
WGCNA Cohort Question
wgcna
updated 10.6 years ago by
Peter Langfelder
★ 3.0k • written 10.6 years ago by
akridgerunner
▴ 30
0
votes
1
reply
1.5k
views
WGCNA package with monozygotic twin data
wgcna
Twin Analysis
within-pair analysis
paired
updated 10.6 years ago by
Peter Langfelder
★ 3.0k • written 10.6 years ago by
mahes.muniandy
• 0
2
votes
5
replies
6.2k
views
Can I use the WGCNA dendrogram to display a heatmap of gene expression?
wgcna
heatmap
desq2
clustering
updated 10.6 years ago by
Dario Strbenac
★ 1.6k • written 10.7 years ago by
Jon Bråte
▴ 270
0
votes
4
replies
3.0k
views
some wgcna issues
wgcna
10.8 years ago
zhouxiuqing
• 0
12
votes
5
replies
9.1k
views
Theoretical WGCNA Question
WGCNA
Theory
Scale-Free Topology
updated 20 months ago by
Garrett
• 0 • written 10.8 years ago by
brohawndg
▴ 150
1
vote
1
reply
4.4k
views
WGCNA - signedKME function
WGCNA
RNA-seq
signedKME
updated 11.0 years ago by
Peter Langfelder
★ 3.0k • written 11.0 years ago by
vieuphoria
▴ 10
3
votes
1
reply
3.6k
views
WGCNA: single channel microarray, one categorical covariate, how to apply it?
wgcna
twochannel
onechannel
updated 11.2 years ago by
Peter Langfelder
★ 3.0k • written 11.2 years ago by
jeiroje
▴ 20
1
vote
2
replies
4.8k
views
Rearrange dendrogram to match merged modules in WGCNA?
wgcna
dendrogram
network
hclust
updated 11.2 years ago by
Keith Hughitt
▴ 180 • written 11.3 years ago by
Jon Bråte
▴ 270
0
votes
1
reply
4.3k
views
Plotting an hclust sub-tree in WGCNA?
wgcna
hclust
plotdendroandcolors
dendrogram
updated 11.3 years ago by
James W. MacDonald
68k • written 11.3 years ago by
Keith Hughitt
▴ 180
2
votes
6
replies
5.8k
views
Error running TOMplot in WGCNA package
wgcna
network
updated 11.3 years ago by
Keith Hughitt
▴ 180 • written 11.3 years ago by
Jon Bråte
▴ 270
4
votes
2
replies
4.5k
views
Selecting genes based on expressional variance
geneexpression
wgcna
rnaseq
updated 11.3 years ago by
Laurent Gatto
1.6k • written 11.3 years ago by
Jon Bråte
▴ 270
8
votes
4
replies
8.3k
views
WGCNA: overlapping colors in plotDendroAndColors?
wgcna
plotDendroAndColors
Network
updated 11.3 years ago by
Peter Langfelder
★ 3.0k • written 11.3 years ago by
Keith Hughitt
▴ 180
336 results • Page
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