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import.bw rtracklayer Windows http

3.2 years ago sla • 0

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deseq2 bioconductor windows xml installation

updated 4.5 years ago by Michael Love 43k • written 4.5 years ago by sarah3 • 0

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software error aspli plotgenomicregions windows

4.8 years ago joanmarquez21 • 0

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software error BigWig import windows

4.8 years ago lsilva.m • 0

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software error R windows

updated 6.3 years ago by Mike Smith ★ 6.6k • written 6.3 years ago by a • 0

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HiTC IRanges windows debian

updated 6.9 years ago by Nicolas Servant ▴ 260 • written 6.9 years ago by René Wiegandt • 0

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pthread windows tokay2

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R h5ls windows linux

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bioconductor R windows diffbind

updated 7.7 years ago by Gord Brown ▴ 670 • written 7.8 years ago by jorrenkuster • 0

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windows variantannotation makevars.win

updated 8.8 years ago by Martin Morgan 25k • written 8.8 years ago by simon ▴ 10

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rhdf5 windows

9.3 years ago • updated 9.2 years ago cyang227 • 0

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package compilation error dll windows

9.3 years ago Miguel Juliá • 0

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Install RMySQL Windows

updated 10.4 years ago by Martin Morgan 25k • written 10.4 years ago by Panagiotis Moulos ▴ 30

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Comment: How to visualize these pathways using pathview by Guido Hooiveld ★ 4.1k

FYI: a similar, if not identical issue has been reported before (`pathview` has problems visualizing some pathways, but not all). You likel…

Comment: Why select top highly expressed genes based on normalized counts, but then plot by Quang NN ▴ 10

I see. Thank you ATpoint!

Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by Prakash Sah • 0

Thanks James!

Comment: Why select top highly expressed genes based on normalized counts, but then plot by ATpoint ★ 4.6k

I think I explained what the differences between approach 1 and 2 is in my answer. I assume that the tutorial uses vst because it is varian…

Comment: Why select top highly expressed genes based on normalized counts, but then plot by Quang NN ▴ 10

Thank you ATpoint for your responses. I am a bit confused because the difference between the two approaches is the selection of the genes…

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Bioconductor Course, Kenya 2025: Applications Open!

Comment: can't install tscR

Answer: Csaw normalization strategies - general inquiry

A: DESeq2 interaction term

Comment: Recount3 data correspond to TCGA data

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