Showing : HTqPCR • reset
1
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5
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1.1k
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Manual creation of qPCRset does not work
bug nondetects HTqPCR
updated 23 months ago by • 0 • written 2.1 years ago by ▴ 230
0
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3
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840
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Technical Replicates in HTqPCR
HTqPCR
written 2.1 years ago by ▴ 230
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0
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1.0k
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How to perform a cluster analysis in RT-qPCR or HT-qPCR results?
cluster qpcr qpcrNorm clusterProfiler HTqPCR
2.9 years ago Javier • 0
0
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0
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879
views
Made a pDATA manually for HTqPCR procedure
HTqPCR phenoData esetVis pData
4.0 years ago Marcelo Laia ▴ 450
0
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0
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751
views
Error when reading qPCR data in SDS format
HTqPCR
4.5 years ago Nghia • 0
1
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1
reply
1.6k
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HTQPCR - create qPCR set from a matrix of CT values
HTqPCR
updated 4.7 years ago by 53k • written 9.8 years ago by ▴ 40
3
votes
4
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4.6k
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Using limma for the analysis of qPCR data
NormqPCR EasyqpcR qPCR HTqPCR limma
updated 4.0 years ago by ▴ 380 • written 4.7 years ago by ▴ 680
0
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0
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752
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Problems creating qPCRset from RT2 array data with HTqPCR package
HTqPCR
5.3 years ago Maximilian Fuchs • 0
0
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0
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743
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HTqPCR package, filterCategory function
HTqPCR filterCategory setCategory
updated 5.8 years ago by 68k • written 5.8 years ago by • 0
0
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0
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1.1k
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Sample grouping (phenoData) and visualization in R package- HtqPCR
HtqPCR grouping visualization R phenoData
6.2 years ago mohammedtoufiq91 ▴ 10
0
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0
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882
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Analyze ct data using HTqPCR
HTqPCR R NormqPCR
6.3 years ago annesha • 0
0
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0
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773
views
Error with HTqPCR rbind
HTqPCR
6.4 years ago NAIARA GARCÍA ▴ 10
0
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1
reply
1.2k
views
HTqPCR: dealing with technical replicates (filterCategory) and inability to analyze datasets with filtered genes (limmaCtData).
limma htqpcr
updated 4.7 years ago by • 0 • written 6.8 years ago by • 0
0
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0
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885
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A problem about changeCtLayout in HTqPCR
htqpcr
6.8 years ago tropicalis • 0
0
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3
replies
1.3k
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Creation of qPCRset in R for HtqPCR
R bioconductor htqpcr qpcrset object
7.0 years ago mohammedtoufiq91 ▴ 10
0
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0
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1.0k
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Creating qPCRset object from Bio-Rad CFX file
htqpcr limma
7.0 years ago dbars • 0
0
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0
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1.1k
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HTqPCR - unable to create a 'qPCRset' object
htqpcr expressionset
7.2 years ago jirkanov • 0
0
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0
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1.1k
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Inter-run calibration in HTqPCR R package
htqpcr R
7.4 years ago dbarscortina • 0
0
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0
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1.2k
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Import problem with HTqPCR Fluidigm 96.96
htqpcr bioconductor fluidigm biomark
7.6 years ago reed27 • 0
0
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0
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1.1k
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HTqPCR for Fluidigm Results
htqpcr fluidigm
7.6 years ago rhonce • 0
0
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0
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1.1k
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HTqPCR trouble with changeCtLayout
htqpcr qPCR
7.7 years ago samantha_jeschonek • 0
2
votes
2
replies
1.5k
views
Reading in delta Ct values using HTqPCR
htqpcr
updated 7.7 years ago by 53k • written 7.7 years ago by ▴ 10
0
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0
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950
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Bugs in HTqPCR 1.30.0?
htqpcr
7.9 years ago h.roest • 0
1
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2
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1.7k
views
No differential expression with limmaCtData possible
limma htqpcr
7.9 years ago h.roest • 0
0
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0
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943
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HTqPCR package: problems with the limmaCtData function
htqpcr
8.3 years ago Frederico Moraes Ferreira ▴ 100
0
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1
reply
1.3k
views
Problem duplicated samples for ChangeCtLayout in HTqPCR with fluidigm 96*96
htqpcr
8.5 years ago carine.genet • 0
0
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0
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1.1k
views
re-format data for HtqPCR
HtqPCR reshape
8.6 years ago Stefany Solano • 0
0
votes
1
reply
1.4k
views
HTqPCR cannot read more recent SDS files
htqpcr
updated 8.7 years ago by • 0 • written 8.7 years ago by ▴ 40
0
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3
replies
1.6k
views
HTqPCR does not copy featureData when subsetting a qPCRset
htqpcr
updated 8.7 years ago by • 0 • written 8.7 years ago by ▴ 40
0
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0
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1.1k
views
Batch Correction in HTqPCR?
qPCR htqpcr
8.7 years ago bradley • 0
3
votes
1
reply
1.7k
views
Errors with HTqPCR v1.28.0 and BioC 3.4
HTqPCR
updated 8.7 years ago by ▴ 40 • written 8.9 years ago by ▴ 20
0
votes
1
reply
1.5k
views
HTqPCR: bug in subsetting qPCRset
HTqPCR htqpcr subsetting
updated 8.7 years ago by ▴ 40 • written 8.9 years ago by ★ 4.1k
3
votes
7
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2.6k
views
Subsetting qPCRset loses sample names, possibly due to change of assayDataElementReplace
HTqPCR
8.7 years ago henrik.seidel ▴ 40
0
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0
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1.1k
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HTqPCR - Multiple plates for multiple samples
htqpcr
9.0 years ago Angela LR • 0
0
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0
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1.2k
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HTqPCR limma decide test issue?
limma decide test HTqPCR
9.0 years ago polemiraza ▴ 70
0
votes
1
reply
1.7k
views
Possible bug in setCategory function from HTqPCR package
htqpcr HTqPCR
updated 9.0 years ago by • 0 • written 10.9 years ago by ▴ 830
0
votes
0
replies
976
views
setCategory flag and flag.pout argument problems
htqpcr
9.0 years ago h.roest • 0
0
votes
0
replies
1.3k
views
Combining TLDA cards for normalization
normalization microrna htqpcr
9.2 years ago jamie_jabalee • 0
1
vote
0
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2.3k
views
HTqPCR readCtData 12 samples x 63 genes - error: row names supplied are of the wrong length
HTqPCR readCtData Heidi Dvinge
9.5 years ago • updated 9.4 years ago virginia.claudio ▴ 10
0
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0
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1.3k
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Error in readCtData
htqpcr readctdata connection readlines
9.5 years ago lizhensor • 0
0
votes
0
replies
1.2k
views
Help with loading Data and reading Ct values
htqpcr
9.6 years ago Pheebz • 0
0
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0
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1.2k
views
error in reading files using HTqPCR
htqpcr
12.0 years ago • updated 9.8 years ago Alex ▴ 10
0
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1
reply
1.4k
views
featureNames converted to numbers in limmaCtData
limma htqpcr
10.2 years ago julio.c.silver • 0
1
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7
replies
2.2k
views
limmaCTData Error requires ndups=2 even when there are no duplicate genes (should be ndups=1)
limma ndups htqpcr software error
updated 10.2 years ago by 53k • written 10.2 years ago by • 0
0
votes
0
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1.8k
views
Problems importing (new) LightCycler data to HTqPCR
htqpcr dataimport
10.5 years ago H.H. • 0
0
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2
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1.6k
views
HTqPCR + setting flags as unreliable problem
htqpcr flags setCategory
10.8 years ago samantha.smith-4 • 0
0
votes
0
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1.2k
views
Bugs in HTqPCR implementation of data normalization
Normalization HTqPCR Normalization HTqPCR
11.3 years ago Peter Langfelder ★ 3.0k
0
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0
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2.4k
views
reading qRT-PCR data
ddCt HTqPCR ReadqPCR ddCt HTqPCR ReadqPCR
11.4 years ago Guest User ★ 13k
0
votes
5
replies
1.9k
views
Reading in mutiple files using readCtData
HTqPCR HTqPCR
updated 11.6 years ago by 68k • written 11.6 years ago by ▴ 50
2
votes
1
reply
1.6k
views
HTqPCR- gene names not maintained in limmaCtData
annotate ddCt HTqPCR annotate ddCt HTqPCR
11.6 years ago Cornwell, Adam ▴ 110
134 results • Page 1 of 3
Recent ...
Replies
Comment: Help with defining groups by Phinney, Brett ▴ 10
I got it working , thank you!!!
Comment: Check removeBatchEffect effectiveness by massimo • 0
I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…
Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0
Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k
Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…
Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k
Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…
Votes
Comment: Check removeBatchEffect effectiveness
Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)
Answer: Error Loading Experiment from SimBenchData Package
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
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