Bioconductor PCAtools

Showing : PCAtools • reset

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201

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COTAN PCAtools

8 months ago Silvia • 0

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1.1k

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DESeq2 eigencorplot PCAtools

16 months ago BioinfGuru ▴ 70

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686

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DESeq2 PCAtools

updated 17 months ago by Michael Love 43k • written 17 months ago by Aaliya • 0

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2.6k

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DESeq2 RSTUDIO PCAtools

updated 17 months ago by swbarnes2 ★ 1.4k • written 17 months ago by Aaliya • 0

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2.2k

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edgeR PCAtools

written 18 months ago by Fabian • 0

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6.0k

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ellipse RNAseq PCAtools

updated 2.5 years ago by CP • 0 • written 4.3 years ago by elizabethe819 • 0

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2.0k

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Biplot FactoMineR proteomics PCAtools ellipse

updated 2.7 years ago by Kevin Blighe ★ 4.0k • written 2.7 years ago by M Tuhin • 0

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1.9k

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illumina PCAtools PCA

updated 2.9 years ago by Kevin Blighe ★ 4.0k • written 2.9 years ago by ilaria.debenedictis • 0

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1.2k

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PCAtools bioconductor

updated 3.2 years ago by James W. MacDonald 68k • written 3.2 years ago by pterry • 0

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2.3k

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PCAtools pcaExplorer pcaMethods

updated 3.3 years ago by Federico Marini ▴ 180 • written 3.3 years ago by m610110001 • 0

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4.2k

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PCAtools edgeR pcaExplorer RNASeq RNAseq123

3.4 years ago Alan • 0

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1.3k

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PCAtools

4.5 years ago luca.s ▴ 50

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3.9k

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PCAtools

updated 4.7 years ago by Kevin Blighe ★ 4.0k • written 4.7 years ago by Terra • 0

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4.4k

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biplot PCA RNASeq PCAtools

updated 4.8 years ago by Kevin Blighe ★ 4.0k • written 4.8 years ago by mschmidt ▴ 10

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2.5k

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PCAtools biplot DESeq2 RNASeq PCA

updated 4.8 years ago by Kevin Blighe ★ 4.0k • written 4.8 years ago by ecg1g15 ▴ 30

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2.1k

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PCATools

updated 4.9 years ago by Kevin Blighe ★ 4.0k • written 4.9 years ago by oakhamwolf • 0

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2.4k

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EDA pcaExplorer PCAtools PCA

updated 3.8 years ago by Miguel ▴ 20 • written 5.1 years ago by k.vitting.seerup ▴ 120

17 results • Page 1 of 1

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Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi by ReinholdGaylord99 • 0

Thank you so much! https://www.nature.com/articles/s41467-021-25960-2

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by Gordon Smyth 53k

I'm not sure that I understand. You have a dataset that, even after pseudo-bulking, still has 6000 samples? That is surprising. Retaining …

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by abaed • 0

Hello again @gordonsmyth, I've now applied the analysis using a more detailed annotation of cell types/clusters, which includes about 100 …

Answer: Sharing a collection of datasets in ExperimentHub by shepherl 4.2k

107 packages would be a lot! It is certainly possible (and recommended) to implement one package that utilizes ExperimentHub for controlli…

Comment: GO.db and others package Download failure by James W. MacDonald 68k

Also, you never need to use anything but `BiocManager::install` to install any package, which has the beneficial side effect of ensuring th…