Bioconductor RNA-SEQ

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biologicalnetworkanalysis genomes RNA-Seq co-expression wgcna

12 days ago Fernanda • 0

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460

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RNASeqData DESeq2 RNA-Seq RNASeq

updated 3 months ago by James W. MacDonald 67k • written 3 months ago by Ben ▴ 50

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589

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DESeq2 PCAplot RNA-Seq DesignModel

updated 4 months ago by Michael Love 42k • written 4 months ago by shaunpeterson • 0

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529

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rna-seq duplicateCorrelation limma voom

4 months ago Dylan.Sheerin • 0

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743

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RNA-seq DESeq2

updated 3 months ago by ATpoint ★ 4.5k • written 5 months ago by Reza • 0

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696

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rna-seq edgeR

updated 5 months ago by Gordon Smyth 51k • written 5 months ago by Netanel • 0

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483

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RNA-Seq WGCNA Worms

10 months ago davca • 0

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RNA-seq DESeq2

12 months ago • updated 11 months ago ar14g12 • 0

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884

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noiseq RNA-seq quality control

updated 4 months ago by baptiste.bidon • 0 • written 5.1 years ago by Arindam ▴ 80

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24k

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deseq2 rna-seq DEGs cooks cutoff

written 5.7 years ago by aishu.jp ▴ 30

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1.1k

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correlation pearsoncorrelation rna-seq differential gene expression

updated 9 months ago by ATpoint ★ 4.5k • written 6.5 years ago by saad_k6 • 0

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8.4k

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deseq2 edgeR rna-seq

updated 5 months ago by Elizabeth • 0 • written 9.2 years ago by gthm ▴ 30

12 results • Page 1 of 1

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Comment: Bumphunter Algorithm Returns Regions with very few CpGs by h1rlw1ndphe4s0 • 0

Hey [subway surfers][1], Is this the algorithm you mentioned yesterday? [1]: https://subwaysurfs.io

Comment: Bioconductor Digest, Vol 68, Issue 7 by parikapain1353 • 0

Hi [melon sandbox][1], is there any new update to this file? [1]: https://melon-sandbox.com

Answer: Which input data is acceptable for MAST? by Andrew_McDavid ▴ 270

Not too familiar with SCT v2. If it also has a point-mass at zero and the non-zero component is roughly-symmetric, then it might work ok w…

Answer: segfault when using singleR with Azimuth reference by James W. MacDonald 67k

The training step is usually faster than the classification step, so you might try running `trainSingleR` on the reference to see if that i…

Comment: Batch Effect in DESeq2, how to control, how to remove it, how to address biologi by James W. MacDonald 67k

You don't. I believe Fisher has a quote that applies here. Also, please don't add to five year old posts. Start a new one.

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Answer: How to control batch effect if Group and batch are same?

Comment: Convert HGVS Representation back to Reference Genome Coordinates

Answer: How to control batch effect if Group and batch are same?

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Popular Question to Andrew_McDavid ▴ 270

Scholar to Ryan C. Thompson ★ 7.9k