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UniProt.ws
•
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2
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2
replies
818
views
Error when trying to run uniport.ws ?
UniProt.ws
updated 20 months ago by
shepherl
3.9k • written 20 months ago by
Mohamed
▴ 30
7
votes
6
replies
4.1k
views
Conversion of UniProt to Ensembl
biomaRt
ensembldb
UniProt.ws
updated 6 months ago by
Marcel Ramos
690 • written 21 months ago by
Recep
▴ 20
1
vote
1
reply
1.2k
views
From KEGG ID's (Kxxxxx) to Uniprot IDs
KEGG
UniProt.ws
updated 21 months ago by
James W. MacDonald
65k • written 21 months ago by
Recep
▴ 20
2
votes
7
replies
2.0k
views
error running UniProt.ws
UniProt.ws
updated 20 months ago by
Marcel Ramos
690 • written 22 months ago by
julien.wollbrett
▴ 10
0
votes
1
reply
1.5k
views
Retrieve isoform sequences for a protein from UniProt
UniProt.ws
biomaRt
updated 2.7 years ago by
Mike Smith
★ 6.5k • written 2.7 years ago by
sgupt46
• 0
2
votes
3
replies
1.1k
views
Accession ID Conversion and Missing Results
UniProt.ws
updated 2.8 years ago by
James W. MacDonald
65k • written 2.8 years ago by
Dario Strbenac
★ 1.5k
2
votes
1
reply
3.1k
views
Convert UniProt Entry Names into Gene Symbols
Proteomics
ProteomicsWorkflow
UniProt.ws
updated 3.3 years ago by
James W. MacDonald
65k • written 3.3 years ago by
Dario Strbenac
★ 1.5k
1
vote
1
reply
910
views
UniProt.ws - Speeding up select() for data retrieval
UniProt.ws
UniProt
updated 3.4 years ago by
James W. MacDonald
65k • written 3.4 years ago by
JavierM
• 0
0
votes
4
replies
1.4k
views
uniprot.ws select error
UniProt.ws
3.4 years ago
Apoorva
▴ 10
1
vote
6
replies
1.5k
views
Error using UniProt.ws
Uniprot.ws
updated 3.7 years ago by
kayla.interdonato
▴ 160 • written 3.7 years ago by
aush
▴ 40
1
vote
4
replies
1.1k
views
UniProt.ws non-functional or abandoned?
uniprot.ws
uniprot
uniprot accessions
updated 5.5 years ago by
James W. MacDonald
65k • written 5.5 years ago by
balin
• 0
6
votes
4
replies
7.5k
views
Converting UniProt Identifier Into Representative Gene Symbol
UniProt.ws
updated 16 months ago by
Marcel Ramos
690 • written 5.7 years ago by
Dario Strbenac
★ 1.5k
1
vote
3
replies
1.4k
views
Very slow select to extract data from UniProt.ws object
uniprot.ws
select
updated 5.9 years ago by
Martin Morgan
25k • written 5.9 years ago by
alxcho
▴ 10
0
votes
1
reply
857
views
UniProt.ws to get Protein function description
uniprot.ws
updated 6.0 years ago by
James W. MacDonald
65k • written 6.0 years ago by
wechat614
• 0
0
votes
7
replies
1.7k
views
Uniprot.ws getting Function [CC]
uniprot.ws
columns
6.1 years ago • updated 6.0 years ago
schmid10
• 0
0
votes
1
reply
1.1k
views
UniProt.ws - single database for two species
uniprot.ws
uniprot
updated 6.5 years ago by
James W. MacDonald
65k • written 6.5 years ago by
l.nilse
• 0
1
vote
7
replies
1.9k
views
UniProt.ws report 1:many mappings in a single row
uniprot.ws
UniProt
annotation
7.5 years ago • updated 7.4 years ago
l.nilse
• 0
0
votes
2
replies
1.5k
views
New functions to UniProt.ws
uniprot.ws
svn
git
updated 7.6 years ago by
Valerie Obenchain
★ 6.8k • written 7.6 years ago by
Csaba Ortutay
• 0
0
votes
3
replies
1.5k
views
Select in UniProt.ws not working?
uniprot.ws
select
updated 7.7 years ago by
Martin Morgan
25k • written 7.7 years ago by
sarah.sandmann
• 0
5
votes
4
replies
3.1k
views
Map uniprot entry name to accession number
uniprot.ws
updated 3.1 years ago by
James W. MacDonald
65k • written 7.9 years ago by
Diego Diez
▴ 760
4
votes
1
reply
1.6k
views
Converting Protein Accessions Into Protein Symbols
uniprot
uniprot.ws
8.2 years ago
Dario Strbenac
★ 1.5k
2
votes
4
replies
3.0k
views
UniProt.ws version 2.10.2
uniprot.ws
subcellular location
uniprot
8.2 years ago
DHS
• 0
0
votes
1
reply
1.8k
views
Error in Using Uniport.ws library
bioconductor
uniprot.ws
updated 8.3 years ago by
Martin Morgan
25k • written 8.3 years ago by
beingseema03
▴ 10
0
votes
3
replies
1.4k
views
Anotations Score of uniprot. ws
uniprot.ws
uniprot
updated 8.4 years ago by
James W. MacDonald
65k • written 8.4 years ago by
cerikahp
• 0
2
votes
2
replies
1.3k
views
Is there a package that has Uniprot protein descriptions?
uniprot.ws
uniprot
uniprot accessions
software error
updated 8.4 years ago by
James W. MacDonald
65k • written 8.4 years ago by
john
▴ 10
0
votes
0
replies
1.2k
views
News:
IPI numbers in annotation packages
annotation
proteomics
uniprot.ws
News
8.6 years ago
James W. MacDonald
65k
0
votes
10
replies
2.6k
views
Secondary accession lookup with UniProt.ws
uniprot.ws
updated 9.1 years ago by
Marc Carlson
★ 7.2k • written 9.1 years ago by
bengelmann
▴ 10
1
vote
4
replies
3.9k
views
problem with retrieving UniProt annotation data
uniprot.ws
uniprot
updated 9.2 years ago by
Marc Carlson
★ 7.2k • written 9.2 years ago by
Guido Hooiveld
★ 3.9k
0
votes
6
replies
2.3k
views
converting UniProt to SGD ids using UniProt.wd
uniprot.ws
uniprot
ensembl
updated 9.3 years ago by
Marc Carlson
★ 7.2k • written 9.3 years ago by
Joseph Barry
▴ 160
0
votes
1
reply
1.5k
views
Load fail for 'UniProt.ws'
uniprot.ws
updated 9.3 years ago by
James W. MacDonald
65k • written 9.3 years ago by
Farhad
• 0
0
votes
2
replies
1.8k
views
Bioconductor Digest, Vol 138, Issue 27
annotate
biovizBase
ggbio
UniProt.ws
Pbase
annotate
biovizBase
ggbio
UniProt.ws
Pbase
updated 9.7 years ago by
Tengfei Yin
▴ 490 • written 9.7 years ago by
Laurent Gatto
1.6k
0
votes
0
replies
2.7k
views
Using UniProt.ws to retrieve protein features
UniProt.ws
UniProt.ws
10.3 years ago
Guest User
★ 13k
32 results • Page
1 of 1
Recent ...
Replies
Answer: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Hi Michael, I think there is something wrong with the generation of nullranges. I was working with small RNA and methylation overlaps. …
Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19 (as at 4 May 2024). In the meantime, you could consider using the goana() and kegga() …
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
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Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
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