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Windows
•
reset
0
votes
2
replies
2.9k
views
R/Rstudio: using rtracklayer to import bigwig files from http works with MacOS but not with Windows
import.bw
rtracklayer
Windows
http
4.2 years ago
sla
• 0
1
vote
3
replies
2.4k
views
unable to install DESeq2 there is no package called XML
deseq2
bioconductor
windows
xml
installation
updated 5.5 years ago by
Michael Love
43k • written 5.5 years ago by
sarah3
• 0
0
votes
1
reply
979
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error
aspli
plotgenomicregions
windows
5.8 years ago
joanmarquez21
• 0
0
votes
5
replies
2.8k
views
rtracklayer::import() BigWig issue on windows (solved)
software error
BigWig
import
windows
5.9 years ago
lsilva.m
• 0
2
votes
4
replies
5.2k
views
Error in windows() function
software error
R
windows
updated 7.3 years ago by
Mike Smith
★ 6.6k • written 7.3 years ago by
a
• 0
0
votes
5
replies
2.2k
views
HiTC importC not working
HiTC
IRanges
windows
debian
updated 7.9 years ago by
Nicolas Servant
▴ 260 • written 7.9 years ago by
René Wiegandt
• 0
0
votes
3
replies
1.5k
views
pthread problem with tokay2 window platform
pthread
windows
tokay2
updated 8.1 years ago by
Aaron Lun
★ 29k • written 8.1 years ago by
jiaxing.lin
• 0
0
votes
1
reply
1.8k
views
rhdf5 h5ls output differs from Linux to Windows
R
h5ls
windows
linux
updated 8.2 years ago by
Mike Smith
★ 6.6k • written 8.4 years ago by
maxime.fortin
• 0
0
votes
14
replies
3.3k
views
Path to file in windows
bioconductor
R
windows
diffbind
updated 8.8 years ago by
Gord Brown
▴ 670 • written 8.8 years ago by
jorrenkuster
• 0
1
vote
1
reply
1.4k
views
Building VariantAnnotation on Windows - Makevars.win error
windows
variantannotation
makevars.win
updated 9.8 years ago by
Martin Morgan
25k • written 9.8 years ago by
simon
▴ 10
0
votes
2
replies
1.9k
views
rhdf5 installation issue on Windows 64bit
rhdf5
windows
10.3 years ago
cyang227
• 0
0
votes
3
replies
3.2k
views
DLL maps not found while compiling package in Windows machine
package
compilation error
dll
windows
10.4 years ago • updated 10.3 years ago
Miguel Juliá
• 0
8
votes
7
replies
2.5k
views
RMySQL availiability with Bioconductor 3.0
Install
RMySQL
Windows
updated 11.4 years ago by
Martin Morgan
25k • written 11.4 years ago by
Panagiotis Moulos
▴ 30
13 results • Page
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Comment: soGGi error
by
shepherl
4.3k
We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…
Comment: using limma trend workflow in CAMERA
by
Gordon Smyth
53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
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by
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Comment: using limma trend workflow in CAMERA
by
A.Barden
▴ 20
Do you need to set trend.var=TRUE when using camera in the limma-voom pipeline with RNA-Seq data (as apposed to limma-trend pipeline)?
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by
Tikaaa2sahaaaq2c
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Votes
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
C: Why limma, edgeR, and DESeq did not implement fold change moderation first?
Comment: using limma trend workflow in CAMERA
C: z-score with DESeq2?
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