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Windows
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reset
0
votes
2
replies
2.3k
views
R/Rstudio: using rtracklayer to import bigwig files from http works with MacOS but not with Windows
import.bw
rtracklayer
Windows
http
3.0 years ago
sla
• 0
1
vote
3
replies
1.8k
views
unable to install DESeq2 there is no package called XML
deseq2
bioconductor
windows
xml
installation
updated 4.3 years ago by
Michael Love
43k • written 4.3 years ago by
sarah3
• 0
0
votes
1
reply
755
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error
aspli
plotgenomicregions
windows
4.6 years ago
joanmarquez21
• 0
0
votes
5
replies
2.1k
views
rtracklayer::import() BigWig issue on windows (solved)
software error
BigWig
import
windows
4.7 years ago
lsilva.m
• 0
2
votes
4
replies
4.2k
views
Error in windows() function
software error
R
windows
updated 6.1 years ago by
Mike Smith
★ 6.6k • written 6.1 years ago by
a
• 0
0
votes
5
replies
1.8k
views
HiTC importC not working
HiTC
IRanges
windows
debian
updated 6.7 years ago by
Nicolas Servant
▴ 260 • written 6.7 years ago by
René Wiegandt
• 0
0
votes
3
replies
1.2k
views
pthread problem with tokay2 window platform
pthread
windows
tokay2
updated 7.0 years ago by
Aaron Lun
★ 28k • written 7.0 years ago by
jiaxing.lin
• 0
0
votes
1
reply
1.5k
views
rhdf5 h5ls output differs from Linux to Windows
R
h5ls
windows
linux
updated 7.1 years ago by
Mike Smith
★ 6.6k • written 7.2 years ago by
maxime.fortin
• 0
0
votes
14
replies
2.6k
views
Path to file in windows
bioconductor
R
windows
diffbind
updated 7.6 years ago by
Gord Brown
▴ 670 • written 7.6 years ago by
jorrenkuster
• 0
1
vote
1
reply
1.2k
views
Building VariantAnnotation on Windows - Makevars.win error
windows
variantannotation
makevars.win
updated 8.6 years ago by
Martin Morgan
25k • written 8.6 years ago by
simon
▴ 10
0
votes
2
replies
1.6k
views
rhdf5 installation issue on Windows 64bit
rhdf5
windows
9.1 years ago
cyang227
• 0
0
votes
3
replies
2.7k
views
DLL maps not found while compiling package in Windows machine
package
compilation error
dll
windows
9.2 years ago
Miguel Juliá
• 0
8
votes
7
replies
2.0k
views
RMySQL availiability with Bioconductor 3.0
Install
RMySQL
Windows
updated 10.2 years ago by
Martin Morgan
25k • written 10.2 years ago by
Panagiotis Moulos
▴ 30
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Comment: What type of counts data to import for performing Isoform analysis in edgeR
by
mohammedtoufiq91
▴ 10
@gordonsmyth I will re-run Salmon with the --numGibbsSamples=50 option. Thank you.
Comment: Differential Expression Genes as Independent Variables
by
Gordon Smyth
52k
Such an analysis cannot be done in limma. Sorry, I cannot tell you how to do it or even whether it is possible.
Comment: Differential Expression Genes as Independent Variables
by
abadgerw
• 0
The data that is repeated is a quantitative metric of post-mortem pathology across multiple sections. Not all patients have the same number…
Answer: Crossover design with limma
by
Gordon Smyth
52k
Your experiment is somewhat more elaborate than a classical crossover design because of the period-specific baseline controls. The analyses…
Answer: Differential Expression Genes as Independent Variables
by
Gordon Smyth
52k
Sorry, your question doesn't make sense to me. There are tens of thousands of genes and you can't run a mixed model analysis with one depen…
Votes
Comment: What type of counts data to import for performing Isoform analysis in edgeR
Answer: What type of counts data to import for performing Isoform analysis in edgeR
Transcript-level differential expression using DESeq2
Comment: What type of counts data to import for performing Isoform analysis in edgeR
Answer: What type of counts data to import for performing Isoform analysis in edgeR
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