Bioconductor Analysis

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1.8k

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Proteomics analysis

updated 22 months ago by jeroen.gilis ▴ 90 • written 22 months ago by Shakiba • 0

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920

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microarray protein analysis ProteomeProfiler

updated 4.2 years ago by Gordon Smyth 50k • written 4.2 years ago by hcnbox • 0

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1.4k

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edger data analysis

8.9 years ago Pau Marc Muñoz Torres ▴ 20

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1.2k

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non-model enrichment organisms analysis

updated 17 months ago by Guido Hooiveld ★ 4.0k • written 19 months ago by yuhang • 0

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1.4k

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agilent microarrays microrna analysis

6.7 years ago arisarkar88 ▴ 40

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1.9k

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mta10 affy analysis

7.8 years ago iankoudinova ▴ 10

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827

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ddCt import analysis R qRTPCR

updated 4.7 years ago by Zhang, Jitao David ▴ 120 • written 4.7 years ago by mohammedtoufiq91 ▴ 10

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1.7k

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cummeRbund Script analysis RNAseq cuffdiff

updated 9.0 years ago by andrew.j.skelton73 ▴ 370 • written 9.0 years ago by mfahim • 0

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1.9k

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minfi 450k EPIC analysis

updated 4.7 years ago by James W. MacDonald 65k • written 4.7 years ago by maduran • 0

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532

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analysis R GOfuncR

updated 11 months ago by Lluís Revilla Sancho ▴ 730 • written 11 months ago by Eliza • 0

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1.7k

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microarray affymetrix microarrays analysis

updated 8.6 years ago by Guido Hooiveld ★ 4.0k • written 8.6 years ago by Michaela.Fuchs • 0

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897

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genomics analysis bioinformatics Job

4.9 years ago jmaanaki • 0

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919

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microarray analysis

6.9 years ago arisarkar88 ▴ 40

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552

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R analysis p_values RNASeq

updated 2.3 years ago by Sean Davis 21k • written 2.3 years ago by johndavidgriner74 • 0

14 results • Page 1 of 1

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Comment: Numerical differences in DESeq2 output depending on different design matrix cons by JKim • 0

The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.

Comment: Ensembl plants at annotationHub? by Daniele • 0

Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k

If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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Popular Question to Vincent J. Carey, Jr. 6.7k

Popular Question to Koen Van den Berge ▴ 180