Showing : bioconductor • reset
1
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3
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1.0k
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Allele frequencies for ALL alleles of one SNP ?
Bioconductor
12 months ago • updated 11 months ago Abiologist • 0
10
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7
replies
2.3k
views
Why in Bioconductor community people rarely upvote questions?
bioconductor
updated 12 months ago by 4.2k • written 2.8 years ago by ▴ 50
1
vote
0
replies
1.3k
views
News: Bioconductor 3.20 is Released!
Bioconductor Release Software
12 months ago shepherl 4.2k
0
votes
0
replies
543
views
News: Announcing the GBCC2025 Logo Design Contest!
Conference Community Galaxy GBCC2025 Bioconductor
12 months ago Maria Doyle ▴ 100
1
vote
3
replies
1.2k
views
Tutorial regarding metabolomics with R
Bioconductor Metabolomics xcms
updated 12 months ago by 68k • written 12 months ago by • 0
1
vote
2
replies
1.0k
views
DESeq2 design and contrasts with 2 drug-treated and one control group
DESeq2 Bioconductor
updated 13 months ago by 43k • written 13 months ago by ▴ 10
0
votes
0
replies
503
views
News: Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries Community Teaching Bioconductor
13 months ago Maria Doyle ▴ 100
2
votes
9
replies
1.8k
views
Can't post a question?
Bioconductor
updated 8 months ago by • 0 • written 13 months ago by • 0
2
votes
2
replies
792
views
How to read OSCA book?
BIOCON OSCA Bioconductor
14 months ago • updated 13 months ago zr • 0
1
vote
2
replies
769
views
WARNING: No Bioconductor dependencies detected.
Bioconductor Biocon
14 months ago katja.danielzik • 0
0
votes
3
replies
844
views
concentration tables suitable as input for new packages?
Bioconductor
written 14 months ago by • 0
2
votes
0
replies
1.0k
views
News: Save the Date for EuroBioC2025 in Barcelona!
EuroBioC2025 Conference Bioconductor Community
14 months ago Maria Doyle ▴ 100
0
votes
5
replies
1.5k
views
ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS
Bioconductor clusterProfiler
updated 13 months ago by ▴ 760 • written 14 months ago by • 0
0
votes
4
replies
2.1k
views
News: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and Galaxy!
Conference Bioconductor Community
updated 24 days ago by • 0 • written 14 months ago by ▴ 100
0
votes
1
reply
2.1k
views
Unable to install/use limma
limma Bioconductor
updated 14 months ago by 68k • written 14 months ago by • 0
1
vote
2
replies
655
views
Review process for delivering R packages
Bioconductor
14 months ago XFWu • 0
0
votes
1
reply
746
views
News: BioCAsia 2024 Registration Now Open!
BioCAsia2024 Conference Community Bioconductor
14 months ago Maria Doyle ▴ 100
1
vote
3
replies
1.6k
views
Non-zero exit status error when installing GenomeInfoDbData
DECIPHER GenomeInfoDbData Bioconductor GenomeInfoDb
written 14 months ago by • 0
0
votes
0
replies
704
views
Job: PhD position: Analysis of epistatic interactions in enzymes using long-read sequencing data
NGS AI Bioconductor
updated 14 months ago by ▴ 10 • written 14 months ago by ▴ 180
0
votes
0
replies
528
views
BioCAsia 2024 Abstract Deadline - August 26th
BioCAsia2024 Community Conference Bioconductor
14 months ago Maria Doyle ▴ 100
0
votes
0
replies
685
views
News: EuroBioC Updates: Important Deadlines
Conference EuroBioC2024 Bioconductor Community EuroBioC
15 months ago Maria Doyle ▴ 100
2
votes
4
replies
829
views
Bioconductor Submission question
Bioconductor
15 months ago XFWu • 0
0
votes
0
replies
543
views
News: Annual Nominations Open for CAB and TAB! Deadline Aug 31
TAB CAB Bioconductor
15 months ago shepherl 4.2k
0
votes
0
replies
546
views
EuroBioC2024 Flashtalks & Birds-of-a-Feather Sessions - submissions open!
Community Conference Bioconductor EuroBioC2024
15 months ago Maria Doyle ▴ 100
0
votes
4
replies
1.2k
views
featureCounts error: Assertion `numOfBuckets > 0' failed
featureCounts Subread Bioconductor
16 months ago • updated 15 months ago Jessica • 0
1
vote
0
replies
881
views
News: Bioconductor Package Download Rate Limitation (HTTP 429)
downloads http429 http Bioconductor
15 months ago shepherl 4.2k
0
votes
2
replies
1.4k
views
Installing Bioconductor
Bioconductor
updated 16 months ago by ▴ 760 • written 16 months ago by • 0
0
votes
0
replies
598
views
News: EuroBioC2024 Carpentries workshops Sep 2-3
Community Workshop Bioconductor EuroBioC2024
16 months ago Maria Doyle ▴ 100
0
votes
0
replies
600
views
News: BioC2024 in-person registration closes soon (July 10)
BioC2024 Conference Bioconductor Community
16 months ago Maria Doyle ▴ 100
0
votes
0
replies
704
views
Difference in Predictive component of PLS and OPLS Model
Metabolomics plotGrouper Bioconductor ropls PLSDAbatch
16 months ago devarti.mahakalkar • 0
0
votes
3
replies
962
views
How to search Pubmed Central or other fulltext literature base using regex?
metaMSdata Bioconductor
16 months ago Abiologist • 0
2
votes
2
replies
5.5k
views
Unable to install the package "tissuesGeneExpression"
bioconductor
updated 16 months ago by • 0 • written 8.3 years ago by ▴ 10
0
votes
1
reply
729
views
BiomaRt listAttributes - which are external ?
Bioconductor getBM
updated 16 months ago by 68k • written 16 months ago by • 0
4
votes
2
replies
1.9k
views
Behaviour of featureCounts when quantifying multi-mapping reads
Bioconductor featurecounts subread
17 months ago Rachael • 0
1
vote
5
replies
3.1k
views
Issues with installing Bioconductor packages (eg GEOquery)
GEOquery Bioconductor
updated 17 months ago by ★ 5.0k • written 17 months ago by • 0
0
votes
1
reply
523
views
How to access the Bioconductor in Windows
Bioconductor
updated 17 months ago by ★ 5.0k • written 17 months ago by • 0
0
votes
0
replies
492
views
EuroBioC2024 Registration is Open!
Community Conference Bioconductor EuroBioC2024
17 months ago Maria Doyle ▴ 100
0
votes
3
replies
1.9k
views
ChAMP not available for bioconductor 3.19
Bioconductor ChAMP
updated 17 months ago by 4.2k • written 17 months ago by • 0
0
votes
0
replies
565
views
News: Legacy Bioconductor Installation
Installation Bioconductor
17 months ago shepherl 4.2k
0
votes
0
replies
651
views
News: Online course: Network Analysis in Systems Biology with R/Bioconductor
SystemsBiology Bioconductor Network
17 months ago info ▴ 10
0
votes
1
reply
575
views
News: Bioconductor Build System
Builds Bioconductor
written 17 months ago by 4.2k
0
votes
0
replies
637
views
News: BioC2024 Bioconductor Carpentries RNA-Seq Workshop July 22-23
BioC2024 Conference Bioconductor Community
17 months ago Maria Doyle ▴ 100
0
votes
1
reply
815
views
Problem in execuation of filterAndTrim command in DADA2
Bioconductor dada2
17 months ago • updated 16 months ago abhisek001 • 0
0
votes
6
replies
1.6k
views
Running ENmix with mouse methylation manifest: readidat error - Error in readmanifest(manifestfile) : length(control.line) == 1 && is.integer(cont…
ENmix Bioconductor
updated 17 months ago by • 0 • written 17 months ago by ▴ 10
3
votes
5
replies
1.4k
views
Error while installing BiocManager::install("org.Vdahliae.eg.db")
org.vdahlaie.eg.db Bioconductor
18 months ago Patadù ▴ 20
1
vote
0
replies
875
views
News: Last Call: Nominations for Bioconductor Awards 2024! Deadline May 15
Recognition Awards Bioconductor Bioc204
19 months ago • updated 18 months ago shepherl 4.2k
0
votes
1
reply
437
views
Recovering my account credentials on Bioconductor
Bioconductor
updated 18 months ago by 4.2k • written 18 months ago by • 0
4
votes
0
replies
1.5k
views
News: Bioconductor 3.19 is Released!
Release Bioconductor Packages Software
18 months ago shepherl 4.2k
0
votes
0
replies
551
views
News: BioC2024 deadlines approaching
BioC2024 Bioconductor Community
18 months ago Maria Doyle ▴ 100
1
vote
0
replies
8.1k
views
Tutorial: Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
bioconductor Install
19 months ago • updated 18 months ago BioinfGuru ▴ 70
906 results • Page 2 of 19
Recent ...
Replies
Answer: Add additional maintainer for MOFA2 by shepherl 4.2k
These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type by Kevin Blighe ★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Answer: featureCounts -L: high unassigned:mapq fraction by Kevin Blighe ★ 4.0k
Hi Katarzyna, The discrepancy arises because your samtools stats were restricted to genic regions only, where alignments are typically o…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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