Showing : bioconductor • reset
1
vote
0
replies
596
views
News: Bioconductor Course, Kenya 2025: Applications Open!
Events Community Training Africa Bioconductor
10 months ago Maria Doyle ▴ 110
0
votes
4
replies
2.3k
views
News: EuroBioC2023 abstract submission closing soon!
presentation EuroBioc2023 Conference community Bioconductor
written 2.6 years ago by ▴ 110
0
votes
2
replies
611
views
Build error on kunpeng2 Linux aarch64
Bioconductor
updated 11 months ago by • 0 • written 11 months ago by • 0
2
votes
1
reply
805
views
bioconductor packages on bioconda
Bioconductor
updated 12 months ago by 68k • written 12 months ago by • 0
1
vote
3
replies
1.0k
views
Allele frequencies for ALL alleles of one SNP ?
Bioconductor
13 months ago • updated 12 months ago Abiologist • 0
10
votes
7
replies
2.4k
views
Why in Bioconductor community people rarely upvote questions?
bioconductor
updated 13 months ago by 4.2k • written 2.9 years ago by ▴ 50
1
vote
0
replies
1.4k
views
News: Bioconductor 3.20 is Released!
Bioconductor Release Software
13 months ago shepherl 4.2k
0
votes
0
replies
561
views
News: Announcing the GBCC2025 Logo Design Contest!
Conference Community Galaxy GBCC2025 Bioconductor
13 months ago Maria Doyle ▴ 110
1
vote
3
replies
1.3k
views
Tutorial regarding metabolomics with R
Bioconductor Metabolomics xcms
updated 13 months ago by 68k • written 13 months ago by • 0
1
vote
2
replies
1.0k
views
DESeq2 design and contrasts with 2 drug-treated and one control group
DESeq2 Bioconductor
updated 14 months ago by 43k • written 14 months ago by ▴ 10
0
votes
0
replies
519
views
News: Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries Community Teaching Bioconductor
14 months ago Maria Doyle ▴ 110
2
votes
9
replies
1.8k
views
Can't post a question?
Bioconductor
updated 9 months ago by • 0 • written 14 months ago by • 0
2
votes
2
replies
814
views
How to read OSCA book?
BIOCON OSCA Bioconductor
15 months ago • updated 14 months ago zr • 0
1
vote
2
replies
791
views
WARNING: No Bioconductor dependencies detected.
Bioconductor Biocon
15 months ago katja.danielzik • 0
0
votes
3
replies
861
views
concentration tables suitable as input for new packages?
Bioconductor
written 15 months ago by • 0
2
votes
0
replies
1.0k
views
News: Save the Date for EuroBioC2025 in Barcelona!
EuroBioC2025 Conference Bioconductor Community
15 months ago Maria Doyle ▴ 110
0
votes
5
replies
1.5k
views
ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS
Bioconductor clusterProfiler
updated 14 months ago by ▴ 760 • written 15 months ago by • 0
0
votes
4
replies
2.2k
views
News: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and Galaxy!
Conference Bioconductor Community
updated 7 weeks ago by • 0 • written 15 months ago by ▴ 110
0
votes
1
reply
2.2k
views
Unable to install/use limma
limma Bioconductor
updated 15 months ago by 68k • written 15 months ago by • 0
1
vote
2
replies
673
views
Review process for delivering R packages
Bioconductor
15 months ago XFWu • 0
0
votes
1
reply
772
views
News: BioCAsia 2024 Registration Now Open!
BioCAsia2024 Conference Community Bioconductor
15 months ago Maria Doyle ▴ 110
1
vote
3
replies
1.6k
views
Non-zero exit status error when installing GenomeInfoDbData
DECIPHER GenomeInfoDbData Bioconductor GenomeInfoDb
written 15 months ago by • 0
0
votes
0
replies
725
views
Job: PhD position: Analysis of epistatic interactions in enzymes using long-read sequencing data
NGS AI Bioconductor
updated 15 months ago by ▴ 10 • written 15 months ago by ▴ 180
0
votes
0
replies
546
views
BioCAsia 2024 Abstract Deadline - August 26th
BioCAsia2024 Community Conference Bioconductor
15 months ago Maria Doyle ▴ 110
0
votes
0
replies
724
views
News: EuroBioC Updates: Important Deadlines
Conference EuroBioC2024 Bioconductor Community EuroBioC
16 months ago Maria Doyle ▴ 110
2
votes
4
replies
860
views
Bioconductor Submission question
Bioconductor
16 months ago XFWu • 0
0
votes
0
replies
562
views
News: Annual Nominations Open for CAB and TAB! Deadline Aug 31
TAB CAB Bioconductor
16 months ago shepherl 4.2k
0
votes
0
replies
564
views
EuroBioC2024 Flashtalks & Birds-of-a-Feather Sessions - submissions open!
Community Conference Bioconductor EuroBioC2024
16 months ago Maria Doyle ▴ 110
0
votes
4
replies
1.2k
views
featureCounts error: Assertion `numOfBuckets > 0' failed
featureCounts Subread Bioconductor
16 months ago Jessica • 0
1
vote
0
replies
904
views
News: Bioconductor Package Download Rate Limitation (HTTP 429)
downloads http429 http Bioconductor
16 months ago shepherl 4.2k
0
votes
2
replies
1.4k
views
Installing Bioconductor
Bioconductor
updated 16 months ago by ▴ 760 • written 17 months ago by • 0
0
votes
0
replies
619
views
News: EuroBioC2024 Carpentries workshops Sep 2-3
Community Workshop Bioconductor EuroBioC2024
17 months ago Maria Doyle ▴ 110
0
votes
0
replies
622
views
News: BioC2024 in-person registration closes soon (July 10)
BioC2024 Conference Bioconductor Community
17 months ago Maria Doyle ▴ 110
0
votes
0
replies
725
views
Difference in Predictive component of PLS and OPLS Model
Metabolomics plotGrouper Bioconductor ropls PLSDAbatch
17 months ago devarti.mahakalkar • 0
0
votes
3
replies
1000
views
How to search Pubmed Central or other fulltext literature base using regex?
metaMSdata Bioconductor
17 months ago Abiologist • 0
2
votes
2
replies
5.6k
views
Unable to install the package "tissuesGeneExpression"
bioconductor
updated 17 months ago by • 0 • written 8.4 years ago by ▴ 10
0
votes
1
reply
749
views
BiomaRt listAttributes - which are external ?
Bioconductor getBM
updated 17 months ago by 68k • written 17 months ago by • 0
4
votes
2
replies
2.0k
views
Behaviour of featureCounts when quantifying multi-mapping reads
Bioconductor featurecounts subread
18 months ago Rachael • 0
1
vote
5
replies
3.2k
views
Issues with installing Bioconductor packages (eg GEOquery)
GEOquery Bioconductor
updated 18 months ago by ★ 5.0k • written 18 months ago by • 0
0
votes
1
reply
537
views
How to access the Bioconductor in Windows
Bioconductor
updated 18 months ago by ★ 5.0k • written 18 months ago by • 0
0
votes
0
replies
513
views
EuroBioC2024 Registration is Open!
Community Conference Bioconductor EuroBioC2024
18 months ago Maria Doyle ▴ 110
0
votes
3
replies
1.9k
views
ChAMP not available for bioconductor 3.19
Bioconductor ChAMP
updated 18 months ago by 4.2k • written 18 months ago by • 0
0
votes
0
replies
574
views
News: Legacy Bioconductor Installation
Installation Bioconductor
18 months ago shepherl 4.2k
0
votes
0
replies
666
views
News: Online course: Network Analysis in Systems Biology with R/Bioconductor
SystemsBiology Bioconductor Network
18 months ago info ▴ 10
0
votes
1
reply
584
views
News: Bioconductor Build System
Builds Bioconductor
written 18 months ago by 4.2k
0
votes
0
replies
652
views
News: BioC2024 Bioconductor Carpentries RNA-Seq Workshop July 22-23
BioC2024 Conference Bioconductor Community
18 months ago Maria Doyle ▴ 110
0
votes
1
reply
836
views
Problem in execuation of filterAndTrim command in DADA2
Bioconductor dada2
18 months ago • updated 17 months ago abhisek001 • 0
0
votes
6
replies
1.6k
views
Running ENmix with mouse methylation manifest: readidat error - Error in readmanifest(manifestfile) : length(control.line) == 1 && is.integer(cont…
ENmix Bioconductor
updated 18 months ago by • 0 • written 18 months ago by ▴ 10
3
votes
5
replies
1.4k
views
Error while installing BiocManager::install("org.Vdahliae.eg.db")
org.vdahlaie.eg.db Bioconductor
19 months ago Patadù ▴ 20
1
vote
0
replies
889
views
News: Last Call: Nominations for Bioconductor Awards 2024! Deadline May 15
Recognition Awards Bioconductor Bioc204
20 months ago • updated 19 months ago shepherl 4.2k
910 results • Page 2 of 19
Recent ...
Replies
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Answer: PTM analysis in LIMPA by Gordon Smyth 53k
For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Answer: problem reading bam files into nucleR by James W. MacDonald 68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Awards • All
Popular Question to James W. MacDonald 68k
Popular Question to Gordon Smyth 53k
Commentator to sina.nassiri ▴ 130
Popular Question to Hervé Pagès 16k
Popular Question to jared.andrews07 ▴ 30
Locations • All
United States, 17 minutes ago
United States, 20 minutes ago
WEHI, Melbourne, Australia, 4 hours ago
The city by the bay, 5 hours ago
Seattle, WA, United States, 5 hours ago
Traffic: 1210 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6