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681
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GBCC2025: New Scholarship Opportunities Available!
Community Conference GBCC2025 Bioconductor
updated 6 months ago by • 0 • written 9 months ago by ▴ 110
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1
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656
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Best tximport quant.genes.sf
tximport tximeta Bioconductor
updated 9 months ago by ★ 5.0k • written 9 months ago by • 0
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2
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904
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Version conflict when pushing to scQTLtools devel branch
Bioconductor
written 10 months ago by • 0
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5
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1.9k
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Package developing and interoperation with Bioconductor
Package Bioconductor
written 11 months ago by • 0
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5
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2.9k
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News: EuroBioC2024 abstract submission is open!
Conference Bioconductor EuroBioC2024
written 2.0 years ago by ▴ 110
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1
reply
1.1k
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News: List of Deprecated Packages for Bioc3.20
Release Devel Bioconductor
16 months ago • updated 11 months ago shepherl 4.3k
0
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0
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706
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News: EuroBioC2025: Abstract Submissions Open!
EuroBioC2025 Community Conference Bioconductor
12 months ago Maria Doyle ▴ 110
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3
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745
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batch effect removal for agilent microarray data
" "Bioconductor" Bioconductor
12 months ago gaye.yilmaz • 0
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734
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Job: Research Software Engineer - Bioconductor tools for biological data science and AI
Bioconductor
12 months ago Wolfgang Huber ★ 13k
0
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5
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2.9k
views
For some reason I can't update BiocManager to 3.20
Bioconductor
updated 12 months ago by 4.3k • written 12 months ago by • 0
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0
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646
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News: GBCC2025 Abstract Submissions & Registration Now Open!
Community Conference GBCC2025 Bioconductor
12 months ago Maria Doyle ▴ 110
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0
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349
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News: Announcing the GBCC2025 Logo Design Winner!
Community Conference GBCC2025 Bioconductor
13 months ago Maria Doyle ▴ 110
1
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0
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722
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News: Bioconductor Course, Kenya 2025: Applications Open!
Events Community Training Africa Bioconductor
13 months ago Maria Doyle ▴ 110
0
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4
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2.4k
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News: EuroBioC2023 abstract submission closing soon!
presentation EuroBioc2023 Conference community Bioconductor
written 2.9 years ago by ▴ 110
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2
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766
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Build error on kunpeng2 Linux aarch64
Bioconductor
updated 14 months ago by • 0 • written 14 months ago by • 0
2
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1
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1.8k
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bioconductor packages on bioconda
Bioconductor
updated 15 months ago by 68k • written 15 months ago by • 0
1
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3
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1.7k
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Allele frequencies for ALL alleles of one SNP ?
Bioconductor
15 months ago Abiologist • 0
10
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7
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2.5k
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Why in Bioconductor community people rarely upvote questions?
bioconductor
updated 15 months ago by 4.3k • written 3.1 years ago by ▴ 50
1
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0
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1.8k
views
News: Bioconductor 3.20 is Released!
Bioconductor Release Software
16 months ago shepherl 4.3k
0
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0
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639
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News: Announcing the GBCC2025 Logo Design Contest!
Conference Community Galaxy GBCC2025 Bioconductor
16 months ago Maria Doyle ▴ 110
1
vote
3
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1.5k
views
Tutorial regarding metabolomics with R
Bioconductor Metabolomics xcms
updated 16 months ago by 68k • written 16 months ago by • 0
1
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2
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1.1k
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DESeq2 design and contrasts with 2 drug-treated and one control group
DESeq2 Bioconductor
updated 17 months ago by 43k • written 17 months ago by ▴ 10
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0
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583
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News: Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries Community Teaching Bioconductor
17 months ago Maria Doyle ▴ 110
2
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9
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1.9k
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Can't post a question?
Bioconductor
updated 11 months ago by • 0 • written 17 months ago by • 0
2
votes
2
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874
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How to read OSCA book?
BIOCON OSCA Bioconductor
17 months ago zr • 0
1
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2
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927
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WARNING: No Bioconductor dependencies detected.
Bioconductor Biocon
17 months ago katja.danielzik • 0
0
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3
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916
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concentration tables suitable as input for new packages?
Bioconductor
written 17 months ago by • 0
2
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0
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1.1k
views
News: Save the Date for EuroBioC2025 in Barcelona!
EuroBioC2025 Conference Bioconductor Community
17 months ago Maria Doyle ▴ 110
0
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5
replies
2.0k
views
ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS
Bioconductor clusterProfiler
updated 17 months ago by ▴ 760 • written 17 months ago by • 0
0
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4
replies
2.4k
views
News: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and Galaxy!
Conference Bioconductor Community
updated 4 months ago by • 0 • written 18 months ago by ▴ 110
0
votes
1
reply
2.7k
views
Unable to install/use limma
limma Bioconductor
updated 18 months ago by 68k • written 18 months ago by • 0
1
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2
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720
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Review process for delivering R packages
Bioconductor
18 months ago XFWu • 0
0
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1
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853
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News: BioCAsia 2024 Registration Now Open!
BioCAsia2024 Conference Community Bioconductor
18 months ago Maria Doyle ▴ 110
1
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3
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1.8k
views
Non-zero exit status error when installing GenomeInfoDbData
DECIPHER GenomeInfoDbData Bioconductor GenomeInfoDb
written 18 months ago by • 0
0
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0
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800
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Job: PhD position: Analysis of epistatic interactions in enzymes using long-read sequencing data
NGS AI Bioconductor
updated 18 months ago by ▴ 10 • written 18 months ago by ▴ 180
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0
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620
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BioCAsia 2024 Abstract Deadline - August 26th
BioCAsia2024 Community Conference Bioconductor
18 months ago Maria Doyle ▴ 110
0
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0
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824
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News: EuroBioC Updates: Important Deadlines
Conference EuroBioC2024 Bioconductor Community EuroBioC
18 months ago Maria Doyle ▴ 110
2
votes
4
replies
923
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Bioconductor Submission question
Bioconductor
18 months ago XFWu • 0
0
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0
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614
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News: Annual Nominations Open for CAB and TAB! Deadline Aug 31
TAB CAB Bioconductor
19 months ago shepherl 4.3k
0
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0
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607
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EuroBioC2024 Flashtalks & Birds-of-a-Feather Sessions - submissions open!
Community Conference Bioconductor EuroBioC2024
19 months ago Maria Doyle ▴ 110
0
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4
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1.4k
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featureCounts error: Assertion `numOfBuckets > 0' failed
featureCounts Subread Bioconductor
19 months ago Jessica • 0
1
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0
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993
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News: Bioconductor Package Download Rate Limitation (HTTP 429)
downloads http429 http Bioconductor
19 months ago shepherl 4.3k
0
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2
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1.8k
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Installing Bioconductor
Bioconductor
updated 19 months ago by ▴ 760 • written 19 months ago by • 0
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0
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686
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News: EuroBioC2024 Carpentries workshops Sep 2-3
Community Workshop Bioconductor EuroBioC2024
19 months ago Maria Doyle ▴ 110
0
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0
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672
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News: BioC2024 in-person registration closes soon (July 10)
BioC2024 Conference Bioconductor Community
20 months ago Maria Doyle ▴ 110
0
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0
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976
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Difference in Predictive component of PLS and OPLS Model
Metabolomics plotGrouper Bioconductor ropls PLSDAbatch
20 months ago devarti.mahakalkar • 0
0
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3
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1.1k
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How to search Pubmed Central or other fulltext literature base using regex?
metaMSdata Bioconductor
20 months ago Abiologist • 0
2
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2
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5.7k
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Unable to install the package "tissuesGeneExpression"
bioconductor
updated 20 months ago by • 0 • written 8.6 years ago by ▴ 10
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1
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909
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BiomaRt listAttributes - which are external ?
Bioconductor getBM
updated 20 months ago by 68k • written 20 months ago by • 0
4
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2
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2.6k
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Behaviour of featureCounts when quantifying multi-mapping reads
Bioconductor featurecounts subread
20 months ago Rachael • 0
921 results • Page 2 of 19
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Answer: Unable to find ENTREZ IDs by James W. MacDonald 68k
Those are the 'symbols', and are a concatenation of LOC and the NCBI Gene ID (what used to be called an Entrez Gene ID). As an example:http…
Answer: Inconsistencies between accessor functions for TxDb databases with selected seql by a2a2hd42aa • 0
Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…
Comment: Can sample-level weights be used when analysing GSVA scores in limma? by A.Barden ▴ 20
Thanks both for this useful information.
Comment: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k
SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by a2a2hd42aa • 0
Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …
Votes
Do I map probes to gene symbols BEFORE or AFTER differentially expressed gene analysis?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
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