Showing : decipher • reset
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DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set
DECIPHER
3 days ago makala • 0
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154
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LearnTaxa with custom Silva
DECIPHER LearnTaxa
5 weeks ago Eryn • 0
0
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2
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909
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convert sequences disambiguated with DECIPHER back to FASTA
DECIPHER FASTA disambiguate
written 4.0 years ago by • 0
0
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3
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749
views
DECIPHER IdTaxa: Speed up training?
DECIPHER idtaxa
updated 10 months ago by ▴ 150 • written 10 months ago by ▴ 30
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5
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1.7k
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Error: 'IdClusters'
DECIPHER
updated 12 months ago by ▴ 10 • written 15 months ago by • 0
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386
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Updating 16S training set with LearnTaxa
DECIPHER
17 months ago Connor • 0
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3
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1.1k
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Problem with multiple sequence alignment using AlignSeqs
R dada2 DECIPHER
updated 17 months ago by ▴ 150 • written 17 months ago by • 0
0
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1
reply
707
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OligoArrayAux fails to compile
DECIPHER
18 months ago fabian.roger08 ▴ 10
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3
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1.2k
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Issue::DesignPrimers DECIPHER
DECIPHER DesignPrimers
updated 2.7 years ago by • 0 • written 2.7 years ago by • 0
0
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1
reply
786
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ORF finding in DECIPHER
ORF DECIPHER ORFhunteR
updated 2.9 years ago by ▴ 150 • written 2.9 years ago by • 0
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5
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2.2k
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Do DECIPHER:IdTaxa / dada2::assignTaxonomy work with ambigious reference training set?
decipher dada2
updated 3.0 years ago by ▴ 10 • written 4.3 years ago by • 0
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5
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1.5k
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DECIPHER maximum allowable size
DECIPHER Alignment alig
updated 3.0 years ago by ▴ 150 • written 3.0 years ago by ▴ 10
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0
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972
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DECIPHER Package on dada2 -Implementing Silva_metaxa2 training set from qza file into a fastq.gz/.Rdata
DECIPHER dada2
3.1 years ago anrongloh • 0
0
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1
reply
856
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Defining groups in Decipher by sequence position in the database (FASTA)
DefiningGroups RStudio DECIPHER Specificprimers
updated 3.2 years ago by ▴ 150 • written 3.3 years ago by • 0
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5
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1.8k
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Program not properly installed/program not accessible by system
R decipher
updated 3.2 years ago by ▴ 150 • written 4.1 years ago by • 0
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0
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784
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DECIPHER Probe Design Questions
DECIPHER
3.5 years ago henry1995910343 • 0
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2
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801
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insufficient alignment
DECIPHER Alignment
3.5 years ago julius_vn • 0
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3
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1.7k
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DECIPHER save alignement in outputs
msa decipher output prettyPrint
updated 3.7 years ago by ▴ 290 • written 3.7 years ago by • 0
1
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6
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1.9k
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Issue with DECIPHER::IdTaxa
DECIPHER IdTaxa
3.7 years ago sebastian.mynott • 0
0
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2
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931
views
how to design probes using decipher
R decipher
4.0 years ago hoonhuiyi • 0
0
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5
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3.9k
views
Error in (function (classes, fdef, mtable)
software error DECIPHER
updated 4.1 years ago by 3.9k • written 4.1 years ago by • 0
0
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21
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2.9k
views
How to use DECIPHER to design group-specific primers
Decipher
4.1 years ago hoonhuiyi • 0
0
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1
reply
921
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DECIPHER::AlignSeqs fails with a large guide tree
DECIPHER
updated 4.4 years ago by ▴ 150 • written 4.4 years ago by ▴ 10
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1
reply
733
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PCR simulation with PNAs
PCR DECIPHER PNA
4.6 years ago marissaruthlee • 0
1
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2
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1.4k
views
Display BrowseSeqs output in R Notebook?
BrowseSeqs DECIPHER notebook rmarkdown
updated 4.7 years ago by ▴ 150 • written 4.7 years ago by • 0
0
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0
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654
views
Alignment larger than the maximum allowable size
DECIPHER
updated 4.9 years ago by 3.9k • written 4.9 years ago by • 0
2
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4
replies
1.7k
views
How to get sequence homology percent from a multiple sequence alignment in DECIPHER?
decipher r protein alignment
6.1 years ago reubenmcgregor88 • 0
2
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2
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1.9k
views
How to combine sequences from different stringsets?
biostrings decipher
updated 6.3 years ago by ★ 6.5k • written 6.3 years ago by • 0
1
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3
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1.2k
views
Transform index to chromosome in DECIPHER package
decipher
updated 6.4 years ago by ▴ 150 • written 6.4 years ago by ▴ 40
5
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7
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1.7k
views
Is it possible to do an alignment to a chosen reference sequence in DECIPHER?
R decipher biostrings
updated 6.4 years ago by ▴ 150 • written 6.4 years ago by • 0
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2
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1.1k
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Is it possible to import many .tsr sequence file into R using bio strings for use in DECIPHER?
r biostrings decipher
6.4 years ago reubenmcgregor88 • 0
2
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5
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1.6k
views
Colour a phylogenetic tree, based on column in DECIPHER?
r decipher biostrings
updated 6.4 years ago by ▴ 150 • written 6.4 years ago by • 0
2
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3
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1.8k
views
Is it possible to import a multiple fasta alignemnt (.mfa) file into DECIPHER?
decipher DNA biostrings
updated 6.4 years ago by ▴ 150 • written 6.4 years ago by • 0
0
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1
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1.2k
views
DECIPHER - AlignSeqs error is.leaf(dend) node stack overflow
decipher alignment
updated 6.6 years ago by ▴ 10 • written 6.6 years ago by • 0
0
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1
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1.6k
views
AlignSeqs error: protect(): protection stack overflow
multiplealignment decipher
6.6 years ago c.l.frankling • 0
2
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5
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1.9k
views
Multiple Sequence Alignment using DNA sequence
msa decipher
7.0 years ago bbista91 ▴ 10
1
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5
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1.6k
views
DECIPHER version bug using biocLite()
DECIPHER
7.9 years ago Vinicius Henrique da Silva ▴ 40
0
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1
reply
970
views
Possible bug in ConsensusSequence
DECIPHER
updated 8.0 years ago by ▴ 10 • written 8.0 years ago by • 0
0
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3
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2.7k
views
mt.teststat
multtest DECIPHER multtest DECIPHER
updated 8.3 years ago by ▴ 20 • written 21.1 years ago by ▴ 220
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0
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1.6k
views
Job: Bioinformatics Postdoc Position at the IMB, Mainz
Genetics DECIPHER Genetics DECIPHER
10.2 years ago Kathi Zarnack ▴ 110
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1
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1.2k
views
Agi4x44PreProcess: Replicated Genes and Custom Annotation Database
Annotation zebrafish probe DECIPHER Annotation zebrafish probe DECIPHER
updated 13.8 years ago by ★ 7.2k • written 13.8 years ago by ▴ 40
0
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1
reply
1.8k
views
boxplot error with expression set using oligo package and Human gene st 1.0 arrays
oligo DECIPHER oligo DECIPHER
updated 14.0 years ago by ★ 4.3k • written 14.0 years ago by ▴ 40
0
votes
0
replies
1.2k
views
Basic Question about gcrma & exporting to excel > (command not working)
Microarray affy gcrma oligo arrayQualityMetrics DECIPHER Microarray affy gcrma oligo
14.0 years ago Dick Beyer ★ 1.4k
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1.5k
views
'Heat Map for Genes in Dataset' in the '(project name).global.plots.pdf' output of the R-GSEA code
Genetics Clustering DECIPHER Genetics Clustering DECIPHER
14.1 years ago Radek Blatny ▴ 60
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0
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1.7k
views
Post-doc position in Paris
Sequencing Epigenetics Cancer Breast DECIPHER Sequencing Epigenetics Cancer Breast
14.9 years ago Joern Toedling ▴ 450
0
votes
4
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1.3k
views
help with large Rgraphviz output
graph DECIPHER graph DECIPHER
updated 18.0 years ago by ★ 7.4k • written 18.0 years ago by ▴ 890
46 results • Page 1 of 1
Recent ...
Replies
Comment: all variables in design formula must be columns in colData (Deseq2) error by Galina • 0
thank you!
Comment: all variables in design formula must be columns in colData (Deseq2) error by ATpoint ★ 4.1k
coldata_rat <- data.frame(conditions=..., batch=...)
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by robersy • 0
Thank you all for your comments. I will follow your suggestions.
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0
Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0
Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…
Votes
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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